Pairwise Alignments

Query, 356 a.a., permase from Pseudomonas simiae WCS417

Subject, 357 a.a., putative Transporter from Pseudomonas putida KT2440

 Score =  154 bits (389), Expect = 3e-42
 Identities = 104/331 (31%), Positives = 181/331 (54%), Gaps = 13/331 (3%)

Query: 18  AVVLAVLLFLAFTAVLTLGGMLAPVLAGMVLAYLMQGLVTTLERLRLPGGAAVGLVFALF 77
           A+++AVLL+       +L  +L P L G++LAYL   LV  LERL L     V +VF LF
Sbjct: 13  ALLIAVLLY-------SLHNILTPFLVGIMLAYLADPLVDRLERLGLSRTWGVVVVFGLF 65

Query: 78  MGLLVLFIVVVLPLLWHQLITLFNELPGMLAKWQSLLLLLPERYPHLVSD----EQVLQA 133
             LL+  ++V++P+L  QL+ L+   P ML   + + L   +    L       +++  A
Sbjct: 66  TLLLLALLLVLVPMLAKQLVRLYELAPQMLDWLEHVALPWVQGRLGLADGFWKFDKIKAA 125

Query: 134 IEAARGEIGKFGQWALTFSLSSLPLLVNIMIYLVLVPILVFFFLKDRVMIGRWVRGYLPR 193
           I A  G+        L+ + +S   LV  +  +VL+P++ F+ L+D  ++   +RG LPR
Sbjct: 126 IGAHMGQTTDIVGMLLSQATASSLALVAWLANMVLIPVVGFYLLRDWDLMMGKLRGLLPR 185

Query: 194 ERA-LITRVAEEMNRQIANYIRGKVIEIIICGGVTYIAFIALDLNYAALLALLVGISVVV 252
           +R   +  +A E +  +  ++RG+++ ++  G +     + + L    L+ +L G++ +V
Sbjct: 186 QREPQVMGLAGECHEVLGAFVRGQLMVMLALGVIYSAGLMLVGLELGLLIGMLAGLAAIV 245

Query: 253 PYVGAVVVTVPVALIALFQWGWS-DQFIYLMAVYGIIQTLDGNVLVPLLFSEAVNLHPVA 311
           PY+G ++      +  LFQ+G      + ++AV+ + Q L+G VL PLL  + + LHPVA
Sbjct: 246 PYMGFIIGIGAALVAGLFQFGGDLYPMLGIVAVFMVGQALEGMVLTPLLVGDRIGLHPVA 305

Query: 312 IICAVLLFGGLWGFWGVFFAIPLATLFKAVL 342
           +I A+L  G L+GF GV  A+P+A +   +L
Sbjct: 306 VIFAILAGGELFGFTGVLLALPVAAVIMVLL 336