Pairwise Alignments

Query, 193 a.a., RNA polymerase sigma-H factor from Pseudomonas simiae WCS417

Subject, 193 a.a., RNA polymerase sigma E factor from Pseudomonas putida KT2440

 Score =  379 bits (974), Expect = e-110
 Identities = 190/192 (98%), Positives = 192/192 (100%)

Query: 1   MLTQEEDQQLVERVQRGDKRAFDLLVLKYQHKILGLIVRFVHDTHEAQDVAQEAFIKAYR 60
           MLTQEEDQQLVERVQRGD+RAFDLLVLKYQHKILGLIVRFVHDTHEAQDVAQEAFIKAYR
Sbjct: 1   MLTQEEDQQLVERVQRGDRRAFDLLVLKYQHKILGLIVRFVHDTHEAQDVAQEAFIKAYR 60

Query: 61  ALGNFRGDSAFYTWLYRIAINTAKNYLVSRGRRPPDSDVSSEDAEFYDGDHGLKDLESPE 120
           ALGNFRGDSAFYTWLYRIAINTAKNYLVSRGRRPPDSDVSSEDAEFYDGDHGLKDLESPE
Sbjct: 61  ALGNFRGDSAFYTWLYRIAINTAKNYLVSRGRRPPDSDVSSEDAEFYDGDHGLKDLESPE 120

Query: 121 RALLRDEIEGTVHRTIQQLPEDLRTALTLREFDGLSYEDIASVMQCPVGTVRSRIFRARE 180
           R+LLRDEIEGTVHRTIQQLPEDLRTALTLREFDGLSYEDIASVMQCPVGTVRSRIFRARE
Sbjct: 121 RSLLRDEIEGTVHRTIQQLPEDLRTALTLREFDGLSYEDIASVMQCPVGTVRSRIFRARE 180

Query: 181 AIDKALQPLLQE 192
           AIDKALQPLLQE
Sbjct: 181 AIDKALQPLLQE 192