Pairwise Alignments

Query, 273 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 466 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 25/258 (9%)

Query: 5   AEKVQQALVRAIDNDELVLPTLPEVALNIRQAAEDPEISISHLSKVIGRDTALSARLIKV 64
           A ++QQ L   I+     +P L + A  I +   DP  +I  ++ V+  D AL+A+++  
Sbjct: 181 ARRIQQRLEATIE-----IPPLADTAQKIIKLRVDPNATIDDITGVVETDPALAAQVVSW 235

Query: 65  VNSPLLRATQEVTDLHTAITR-LGTNYSSNLAIGLVMEQIFHARSDVVEQKMRDVWRRSL 123
             SP   +  ++  +  AI R LG +   NLA+GL + +      D   Q     W +S+
Sbjct: 236 AASPYYASPGKIRSVEDAIVRVLGFDLVINLALGLALGKTLSLPKDHPHQST-PYWHQSI 294

Query: 124 EVAGVSYALCRSHSQLKPDQAAL---GGLVHQIGVLPILTYAEDHYELLADPVSLN---- 176
             A V   L R+  + +  +A L    GL+H  G L +      H+ L+   + +N    
Sbjct: 295 YTAAVIEGLTRAMPRAQRPEAGLTYLAGLLHNFGYLLLAHVFPPHFSLICRHLEVNPHLC 354

Query: 177 ------HVIESIHPLLGDKLLGVWDFPEMLAKLPGQYLDLERDSPKLDYIDLVQVAV-LY 229
                 H++      +G  L+  WD P+ L+       D   D    +Y +LV +AV L 
Sbjct: 355 HSYVEQHLLGISREQIGAWLMRYWDMPDELSTALRFQHDPTYDGQYAEYPNLVCLAVRLL 414

Query: 230 CHRGTDHPLASVPVSTLP 247
             RG    + S P  T+P
Sbjct: 415 RSRG----IGSGPDETIP 428