Pairwise Alignments

Query, 461 a.a., histidine kinase from Pseudomonas simiae WCS417

Subject, 499 a.a., integral membrane sensor signal transduction histidine kinase from Variovorax sp. SCN45

 Score =  155 bits (392), Expect = 3e-42
 Identities = 113/283 (39%), Positives = 147/283 (51%), Gaps = 14/283 (4%)

Query: 183 LLLVWFAVSAALRPLERLRTAVEERQPDDLRPLPLVEVQHEFGPLVRSLNHFTERLRGQF 242
           LL  W ++  ALRP  ++   +  R P DL P+  +    E  PLV + N   +RLR   
Sbjct: 195 LLPAWLSIRLALRPWRKVAREIASRGPHDLAPVTALPRHEELLPLVHNFNALMDRLRASI 254

Query: 243 ERQAQFIADAAHELRTPLAALKARLEL--GLRAEDPATWR--STLETAAQGTDRLTHLAN 298
            R+  FIADAAHELRTP+AA++  +E    L  +   T R             R   L  
Sbjct: 255 AREQSFIADAAHELRTPIAAMRVNVEALQSLLTQHIPTERQHELFARVLNSNARAERLVG 314

Query: 299 QLLSLARIENGARAIAEGGAQLLDLSQLARELGMAMAPLAHARGVALALEADEPVWLRGE 358
           QLL L R  + A+A A G  +L DL Q   E   A++ LAH R V + L  DEPV + G+
Sbjct: 315 QLLRLMR--SNAQASAPGPLRLDDLLQ---ERLAALSALAHVREVEIELVTDEPVEIAGD 369

Query: 359 PTLLNELLSNLVDNALAHTSPGGNV---ILRVTAPAVLEVEDDGPGIPLDERDRVFERFY 415
              L  ++ NL+DNA  ++  G  V   I RV   AVL V D GPGI    R+RVF+RF+
Sbjct: 370 RDSLVSMIDNLIDNATKYSPVGSTVSVGIRRVGNEAVLTVADQGPGIMPALRERVFDRFF 429

Query: 416 RRSQQGM-GSGLGLAIVGEICRAHLAQISLH-DGEQAGLKVRV 456
           R   Q   GSGLGLAIV  +  AH   I+L   G   GL+V V
Sbjct: 430 RDPDQTQTGSGLGLAIVRAVIDAHGGTIALDGTGLGPGLQVTV 472