Pairwise Alignments

Query, 430 a.a., porin from Pseudomonas simiae WCS417

Subject, 439 a.a., porin from Pseudomonas simiae WCS417

 Score =  233 bits (595), Expect = 7e-66
 Identities = 143/418 (34%), Positives = 204/418 (48%), Gaps = 36/418 (8%)

Query: 39  FFEDSSATLETRNMYFNRDFRDGTSAQQSK--RDEWAQGFMLNLQSGYTDGTVGFGVDAL 96
           F E S+  +  RN YFNRD R G S+       + WAQG +   +SG+T GTVGFG+DA 
Sbjct: 30  FIEGSTVNVLARNFYFNRDDRKGQSSPTGNGYSEAWAQGLIGRFESGFTQGTVGFGLDAF 89

Query: 97  GMLGVKLDSSPDRTG----TGLLPTHDDGRAADEYSKLGLTGKVKISATELKIGSLIPEL 152
            M+GVKLDS   R+G     G+LP        D YSK+G   K+++  T +K G + P  
Sbjct: 90  AMVGVKLDSGTGRSGGKGSFGVLPVDSSNHPEDNYSKVGGAAKLRVLDTVIKAGDVFPLT 149

Query: 153 PILKPNDGRILPQTFNGGLITSKEFKNLVFTGGRLDKAKDRDDTNYEDIALNNKNSRFVS 212
           P++   D R+LP++F G    +   + L   GGRL        T     A +  +  F +
Sbjct: 150 PVVAYGDSRVLPESFRGVTAQNTSLEGLSLQGGRL--------TGMSQPAQSGMDKGFAT 201

Query: 213 GATG----KHFNFGGADYQFADKITGSYHFAQLDDVYRQHFLGLVASRPMGP--GTFGTD 266
              G        + G DY     ++ S + ++L D + Q++ G  A  P+      FG D
Sbjct: 202 FYAGPVDSPWIGYFGGDYTVNKNLSFSLYSSRLKDAWDQYYFGSAARYPLNDEVSLFG-D 260

Query: 267 LRLAISDDTGAARGGKIDNTSLNGLFSYALNGHKLSAGYQHMSGDSAFPYVDGSDP-YLV 325
                + D G  R G  DN   +      +  H L+  +Q  +GD  F Y+  SD  +L 
Sbjct: 261 FNYYKAVDEGKKRLGAFDNNIWSARLGVKVGAHSLAVSHQRNNGDDDFDYLRQSDSIFLN 320

Query: 326 NFVQINDFAGAEERSWQARYDFDFAKLGIPGLSFMSRYLSGDNIKLKNGET--------- 376
           N +Q +DF   +ERSW  RYD D    GIPGLSFM+RY  G      N            
Sbjct: 321 NSIQYSDFNSPKERSWMVRYDLDMQAFGIPGLSFMTRYGKGSGADYSNANAVYMRRDGAG 380

Query: 377 -----GKEWERNSEIKYVVQTGTFKDVAVRLRNATYRSNYSARDADEMRLLVSYSVAL 429
                 + WER+ E  YVVQ G  KD+++RLR AT RS+    D +E+R++V Y +A+
Sbjct: 381 NPLTDQRRWERDIEASYVVQAGRLKDLSLRLRQATVRSSAFESDLEEVRVIVEYPIAV 438