Pairwise Alignments

Query, 430 a.a., porin from Pseudomonas simiae WCS417

Subject, 430 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  308 bits (789), Expect = 2e-88
 Identities = 168/411 (40%), Positives = 243/411 (59%), Gaps = 6/411 (1%)

Query: 25  AATLAGFSPLSQAAFFEDSSATLETRNMYFNRDFRDGTSAQ-QSKRDEWAQGFMLNLQSG 83
           AA L   +   +A F E + ATL+ RN +F+RD+ D   A  QS+  EWAQGF+LN  SG
Sbjct: 21  AAALCAEATAEEAGFIEGARATLQARNYFFSRDYADIKGASTQSRTQEWAQGFILNASSG 80

Query: 84  YTDGTVGFGVDALGMLGVKLDSSPDRTGTGLLPTHDDGRAADEYSKLGLTGKVKISATEL 143
           YT GT+G GVD  G+LG KLDSSP+   +GLLP+ D G++ADEYS+LG   K K+S TEL
Sbjct: 81  YTQGTLGVGVDVTGLLGFKLDSSPEHARSGLLPSLDSGKSADEYSRLGAAIKFKVSQTEL 140

Query: 144 KIGSLIPELPILKPNDGRILPQTFNGGLITSKEFKNLVFTGGRLDKAKDRDDTNYEDI-A 202
           K+G L+P LP+L  +D R+LP T+ G ++ S+EF  L  + G+      RD +N + + A
Sbjct: 141 KVGELMPNLPVLLFSDLRLLPPTYQGAMLESREFAGLTLSAGQFRSTSLRDSSNSQKMYA 200

Query: 203 LNNK--NSRFVSGATGKHFNFGGADYQFADKITG-SYHFAQLDDVYRQHFLGLVASRPMG 259
           L N   N   ++  T   FN+ GADY F D  T      AQL+D+Y+Q F     + P+G
Sbjct: 201 LVNDPINPARLARFTSDRFNYVGADYAFNDNRTSVGVWQAQLEDIYQQRFYSFKHAEPLG 260

Query: 260 PGTFGTDLRLAISDDTGAARGGKIDNTSLNGLFSYALNGHKLSAGYQHMSGDSAFPYVDG 319
             T G +     + + G+   G  DN +L  LFS    GH    GYQ + GD  F  V  
Sbjct: 261 SWTLGVNAGYFDAREDGSKVAGDYDNHALFSLFSAKTGGHTFYVGYQQIGGDDGFIQVGA 320

Query: 320 SDPYLVNFVQINDFAGAEERSWQARYDFDFAKLGIPGLSFMSRYLSGDNIKLKNGETGKE 379
           +   + N +   +F+   ERSWQ R+D++F  LG+PGL+   RY+ G +++   G  G++
Sbjct: 321 NTNPMGNTLPTYEFSAPGERSWQVRHDYNFVALGLPGLTSTLRYVKGRDVETGLGFEGRD 380

Query: 380 WERNSEIKYVVQTGTFKDVAVRLRNATYRSNYSARDADEMRLLVSYSVALW 430
            ER+ ++ YVVQ+G    + +R+RN   RSNY   D DE RL++SY++ ++
Sbjct: 381 RERDLDLAYVVQSGPLAGLGIRVRNVMARSNYRT-DIDENRLILSYTIKVF 430