Pairwise Alignments

Query, 430 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  327 bits (838), Expect = 4e-94
 Identities = 171/397 (43%), Positives = 250/397 (62%), Gaps = 11/397 (2%)

Query: 36  QAAFFEDSSATLETRNMYFNRDFRDGTSAQQSKRDEWAQGFMLNLQSGYTDGTVGFGVDA 95
           +  F ED+   L  RN YFNRDFRD   A + K +EWAQGF+    SGYT G +GFG+D 
Sbjct: 29  EGGFLEDAKGGLTLRNYYFNRDFRD-PGAAKGKVEEWAQGFIFKFSSGYTPGLIGFGLDG 87

Query: 96  LGMLGVKLDSSPDRTGTGLLPTHDDGRAADEYSKLGLTGKVKISATELKIGSLIPELPIL 155
           + + GVKLDS    +G+ LLP HDDGRAAD+Y + GL  K+++SATELK+G L+P++P+L
Sbjct: 88  IALFGVKLDSGGGTSGSELLPVHDDGRAADDYGRAGLAAKLRMSATELKVGELLPDIPLL 147

Query: 156 KPNDGRILPQTFNGGLITSKEFKNLVFTGGRLDKAKDRDDTNYEDIALNNKNSRFVSGAT 215
           + +DGR+LPQTF G ++ S+E + L    G+  +   R  ++ +D+     ++    G T
Sbjct: 148 RYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSDMQDL-----SAWAAPGVT 202

Query: 216 GKHFNFGGADYQFADKIT--GSYHFAQLDDVYRQHFLGLVASRPMGPGTFGTDLRLAISD 273
              FN+ GA+Y+F  + T  G++H +QL+D+Y+Q +  L+ S+ +G  T G +L   I  
Sbjct: 203 SDGFNYAGAEYRFNQQRTLIGAWH-SQLEDIYQQSYFNLLHSQRVGEWTLGANLGYFIDR 261

Query: 274 DTGAARGGKIDNTSLNGLFSYALNGHKLSAGYQHMSGDSAFPYVDGSDPYLVNFVQIN-D 332
           D G AR G I + +   L S + +GH L  G Q +SGDS +  V GS    +     N +
Sbjct: 262 DDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSVYGSSGRTLGNDMFNGN 321

Query: 333 FAGAEERSWQARYDFDFAKLGIPGLSFMSRYLSGDNIKLKNGETGKEWERNSEIKYVVQT 392
           F+ A+ERSWQ RYD++FA LG+PGL  M RY  G+N     G  GKEWER++E+ Y  Q+
Sbjct: 322 FSNADERSWQVRYDYNFAALGVPGLLAMVRYGHGENATTAAGSNGKEWERDAEVNYTFQS 381

Query: 393 GTFKDVAVRLRNATYRSNYSARDADEMRLLVSYSVAL 429
           G  K++ +RL NAT R ++++ D D+ RL+VSY + L
Sbjct: 382 GALKNLNIRLNNATNRRSFNS-DLDQTRLIVSYPLTL 417