Pairwise Alignments

Query, 430 a.a., porin from Pseudomonas simiae WCS417

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  234 bits (596), Expect = 5e-66
 Identities = 145/444 (32%), Positives = 219/444 (49%), Gaps = 42/444 (9%)

Query: 22  LASAATLAGFSPLSQAA------FFEDSSATLETRNMYFNRDFRDGTS--------AQQS 67
           LA+   LAG      AA      F E S+ ++  RN YFNRD RD  +        A   
Sbjct: 9   LAACLALAGVGSQVVAAEKSADGFMEGSTLSVLNRNFYFNRDNRDSVAPTHNPSKQADNG 68

Query: 68  KRDEWAQGFMLNLQSGYTDGTVGFGVDALGMLGVKLDSSPDRTGT----GLLPTHDDGRA 123
             + W    +   +SG+T GTVG G+DA  MLG+KLD+   R G      +LP   DG+A
Sbjct: 69  YSEAWGHAVITRFESGFTQGTVGVGLDAFAMLGLKLDTGGGRNGGRSSFDVLPVDRDGQA 128

Query: 124 ADEYSKLGLTGKVKISATELKIGSLIPELPILKPNDGRILPQTFNGGLITSKEFKNLVFT 183
            DEY+K+G   K+++  T LK+G + P  P++   D R+LP++F G  + +   K+L   
Sbjct: 129 RDEYTKVGGAAKLRLFDTVLKVGDVFPANPVVAAGDSRLLPESFRGVTLENSSIKDLTLQ 188

Query: 184 GGRLDKAKDRDDTNYEDIALNNKNSRFVSGATGKHFNFGGADYQFADKITGSYHFAQLDD 243
            GRL        ++  +    N  + +          +GG DY+  + ++ S   ++L D
Sbjct: 189 AGRLHAMSQPMSSDLRE----NFVTFYGGPVDSPWIAYGGGDYRLNEHVSVSLFSSRLKD 244

Query: 244 VYRQHFLGLVASRPMGPGTF---GTDLRLAISDDTGAARGGKIDNTSLNGLFSYALNGHK 300
            + Q++ G   S P+        G +   A+  D G  R G  DN   +         H 
Sbjct: 245 AWNQYYAGTSLSWPLSEALALIGGFNYYKAV--DEGQQRLGAFDNDIWSAKLGVRFGAHT 302

Query: 301 LSAGYQHMSGDSAFPYVDGSDP-YLVNFVQINDFAGAEERSWQARYDFDFAKLGIPGLSF 359
           L+  +Q  +GD  F Y+  SD  +L N +Q +DF   +ERSW  RYD + A  G+PGLSF
Sbjct: 303 LALTHQRNNGDDDFDYLRQSDSIFLDNSIQYSDFNAPKERSWMLRYDLNMAAYGVPGLSF 362

Query: 360 MSRYLSGDNIKLKNGET--------------GKEWERNSEIKYVVQTGTFKDVAVRLRNA 405
           M+RY  G++    N                  K WER+ E+KYVVQTG  KD+++R+R A
Sbjct: 363 MTRYGKGNDADYSNANATYMRRDVAGNPLTDQKRWERDIEVKYVVQTGAAKDLSLRVRQA 422

Query: 406 TYRSNYSARDADEMRLLVSYSVAL 429
           T R+     D DE+R++V Y +++
Sbjct: 423 TTRATAFESDLDEVRMIVEYPLSI 446