Pairwise Alignments

Query, 430 a.a., porin from Pseudomonas simiae WCS417

Subject, 426 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  359 bits (922), Expect = e-104
 Identities = 188/404 (46%), Positives = 259/404 (64%), Gaps = 14/404 (3%)

Query: 35  SQAAFFEDSSATLETRNMYFNRDFRDGTSAQQSKRDEWAQGFMLNLQSGYTDGTVGFGVD 94
           +QAAF  D S +LE RN YF+RDF  G SA QS+R EWAQGFML LQSGYTDG VGFG+D
Sbjct: 22  AQAAFIHDGSGSLELRNFYFDRDFH-GDSATQSRRGEWAQGFMLRLQSGYTDGVVGFGLD 80

Query: 95  ALGMLGVKLDSSPDRTGTGLLPTHDDGRAADEYSKLGLTGKVKISATELKIGSLIPELPI 154
           A GMLG+KLDSSPDR+G+GLLP   D RAAD+Y+K   T K +++ +ELK G L P+LP+
Sbjct: 81  AAGMLGLKLDSSPDRSGSGLLPRGSDKRAADDYAKAVATFKARLAQSELKAGGLSPQLPL 140

Query: 155 LKPNDGRILPQTFNGGLITSKEFKNLVFTGGRLDKAKDRDDTNYEDIALNNKNSRFVSGA 214
           L  N  R+ PQ FNG  + SK+     FT  ++D  K RD T+YED+    +   + +  
Sbjct: 141 LASNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDYEDLTAMAQQGAYSATV 200

Query: 215 TGKHFNFGGADYQFADKITGSYHFAQLDDVYRQHFLGLVASRPMGPGTFGTDLRLAISDD 274
           T     + G DYQ  + +T S H + L+D++R+ F G      +GPG   T+ R   + +
Sbjct: 201 TSDRLRYAGVDYQPLNNLTLSLHTSVLEDLFRRDFAGFKFKTRLGPGDVFTEWRWFNARE 260

Query: 275 TGAARGGKIDNTSLNGLFSYALNGHKLSAGYQHMSGDSAFPYVDGSDPYLVNFVQINDFA 334
            G A  G +DN +L+  F Y++ GH  S GYQ + GD+A+ YV G+D YL +  Q++ FA
Sbjct: 261 QGRALLGGVDNQTLSTNFGYSVQGHTFSGGYQKVRGDTAYAYVGGTDTYLFSEQQVSTFA 320

Query: 335 GAEERSWQARYDFDFAKLGIPGLSFMSRYLSGDNI-----------KLKNGE-TGKEWER 382
            A ER+W  RYD++FA +GIPGL+F  RY+ GD +            L  G+  G+EWER
Sbjct: 321 LANERAWMLRYDYNFAAVGIPGLTFNVRYVKGDQVDPQRIASVKGRALAAGDGEGREWER 380

Query: 383 NSEIKYVVQTGTFKDVAVRLRNATYRSNYSARDADEMRLLVSYS 426
            ++I YVVQ+G  ++V++R RNA+ RSN+ A  ADE R++V Y+
Sbjct: 381 TTDITYVVQSGALRNVSLRWRNASMRSNF-ADAADENRVIVGYT 423