Pairwise Alignments

Query, 430 a.a., porin from Pseudomonas simiae WCS417

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  325 bits (833), Expect = 2e-93
 Identities = 182/399 (45%), Positives = 248/399 (62%), Gaps = 6/399 (1%)

Query: 35  SQAAFFEDSSATLETRNMYFNRDFRDGTSA-QQSKRDEWAQGFMLNLQSGYTDGTVGFGV 93
           ++  FFEDS ATL  RN YF+RDF D   A +QSK +EWAQGF+L+ +SGYT G VGFGV
Sbjct: 21  AEGGFFEDSKATLSARNYYFSRDFSDIVGANKQSKAEEWAQGFILDFKSGYTPGPVGFGV 80

Query: 94  DALGMLGVKLDSSPDRTGTGLLPTHDDGRAADEYSKLGLTGKVKISATELKIGSLIPELP 153
           DALG+LG+KLDSSPDRT TGLLP H DGRAADEYS+L  T K ++S TEL+ G L P LP
Sbjct: 81  DALGLLGIKLDSSPDRTNTGLLPVHGDGRAADEYSRLAPTFKARLSKTELRAGELQPNLP 140

Query: 154 ILKPNDGRILPQTFNGGLITSKEFKNLVFTGGRLDKAKDRDDTNYEDIALNNKNSRF-VS 212
           +L  +D R+LP T+ G  ++S E   L    G L     R++    D  +N       + 
Sbjct: 141 VLTFSDIRLLPPTYQGVSLSSSEIDGLTMQAGHLKSTHLRNEGG--DGKMNAMLGHVPMR 198

Query: 213 GATGKHFNFGGADYQF-ADKITGSYHFAQLDDVYRQHFLGLVASRPMGPGTFGTDLRLAI 271
            A    FN+ G DY F A++ + S  + QL+D+Y+Q F+GL  S+P+G      +L    
Sbjct: 199 QAESDAFNYVGGDYAFNANQSSVSLWYGQLEDIYQQGFVGLKHSKPVGDWVLSANLGYFT 258

Query: 272 SDDTGAARGGKIDNTSLNGLFSYALNGHKLSAGYQHMSGDSAFPYVDGSDPYLVNFVQIN 331
           + + G A  G IDN +   LF+    GH   AGYQ + GDS FP V  +   L N V   
Sbjct: 259 AREQGDALLGNIDNQAFFSLFTARHGGHSFHAGYQGIYGDSPFPRVFANISPLGNEVPTY 318

Query: 332 DFAGAEERSWQARYDFDFAKLGIPGLSFMSRYLSGDNIKLKNGETGKEWERNSEIKYVVQ 391
           +FA  +ERS+Q RYD++FA +G+PGL+   RY++G+N+    G  G++ ER+ +I Y VQ
Sbjct: 319 EFAYTDERSYQVRYDYNFAAMGVPGLTATVRYITGNNVDTGLGYEGRDRERDLDIGYAVQ 378

Query: 392 TGTFKDVAVRLRNATYRSNYSARDADEMRLLVSYSVALW 430
           +G  K + +R+RNA  RSNY + D DE RL + Y+  L+
Sbjct: 379 SGALKGLGIRVRNAMARSNYRS-DIDENRLTLVYTWQLF 416