Pairwise Alignments

Query, 430 a.a., porin from Pseudomonas simiae WCS417

Subject, 410 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  294 bits (752), Expect = 4e-84
 Identities = 164/414 (39%), Positives = 239/414 (57%), Gaps = 19/414 (4%)

Query: 22  LASAATLAGFSPLSQAA--FFEDSSATLETRNMYFNRDFRDGTSAQQSKRDEWAQGFMLN 79
           L     LA   PL   A  F +D+ A+L  RN Y NRD+    +A Q K +EW Q F+ +
Sbjct: 9   LVPTFALAASLPLQALAEGFVDDAKASLTLRNFYMNRDYTG--TASQGKAEEWTQSFIFD 66

Query: 80  LQSGYTDGTVGFGVDALGMLGVKLDSSPDRTGTGLLPTHDDGRAADEYSKLGLTGKVKIS 139
            +SGYT G VGFGVD LG+  +KLD      GT LLP HDDGR AD++ +  L GK+++S
Sbjct: 67  FKSGYTPGVVGFGVDVLGLYSIKLDGGKGTAGTQLLPVHDDGRPADDFGRTALAGKMRVS 126

Query: 140 ATELKIGSLIPELPILKPNDGRILPQTFNGGLITSKEFKNLVFTGGRLDKAKDRDDTNYE 199
            TELK+G   P LPIL+ +DGR LPQT  G  +TS E   L   GG+  +   R+D + +
Sbjct: 127 RTELKVGEWSPTLPILRADDGRSLPQTLQGAQVTSNELAGLSLYGGQFRQNSPRNDASMQ 186

Query: 200 DIALNNKNSRFVSGATGKHFNFGGADYQFADK--ITGSYHFAQLDDVYRQHFLGLVASRP 257
           D++L  +     +  T   FNF G +Y+F  +  + G++ +AQL+D+Y+Q +  +   +P
Sbjct: 187 DMSLFTR-----TAFTSDRFNFAGGEYRFNQERTLVGAW-YAQLEDIYQQRYFQVQHQQP 240

Query: 258 MGPGTFGTDLRLAISDDTGAARGGKIDNTSLNGLFSYALNGHKLSAGYQHMSGDSAFPYV 317
           +G    G +L      D G A+ G+++N + +GLFS  L G+    G Q + GD  +  V
Sbjct: 241 LGNWVLGANLGYFWGKDDGGAKAGELNNRTASGLFSAKLGGNTFYVGLQKVMGDDEWFRV 300

Query: 318 DG-SDPYLVNFVQINDFAGAEERSWQARYDFDFAKLGIPGLSFMSRYLSGDNIKLKNGET 376
           +G S   L N    + +  A ERSWQ R+DF+F  LGIPGL+ M+RY+ G N+       
Sbjct: 301 NGASGGTLANDAFGSSYESARERSWQVRHDFNFVVLGIPGLTLMNRYIHGYNV-----HN 355

Query: 377 GKEWERNSEIKYVVQTGTFKDVAVRLRNATYRSNY-SARDADEMRLLVSYSVAL 429
                R SE+ YVVQ+G FK + ++ RN++ R ++ S    DE RL+VSY ++L
Sbjct: 356 ASTQGRESELAYVVQSGPFKALNLKWRNSSQRRDWGSTNSFDENRLIVSYPLSL 409