Pairwise Alignments

Query, 430 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  374 bits (961), Expect = e-108
 Identities = 196/416 (47%), Positives = 269/416 (64%), Gaps = 15/416 (3%)

Query: 23  ASAATLAGFSPLSQAA-FFEDSSATLETRNMYFNRDFRD--GTSAQ-----QSKRDEWAQ 74
           A+   L G+ P++ AA F EDS   L+ RN+YFN +FRD  G SA+     +S+R EWAQ
Sbjct: 9   ATCGLLCGWLPVAGAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQ 68

Query: 75  GFMLNLQSGYTDGTVGFGVDALGMLGVKLDSSPDRTGTGLLPTHDDGRAADEYSKLGLTG 134
           GF+L+ QSG+T GT+G GVDA+G+LGV+LDS   R+GTGLLP HDDGRAADE++  G+T 
Sbjct: 69  GFLLDYQSGFTQGTLGLGVDAMGLLGVRLDSGRGRSGTGLLPVHDDGRAADEFASAGITA 128

Query: 135 KVKISATELKIGSLIPELPILKPNDGRILPQTFNGGLITSKEFKNLVFTGGRLDKAKDRD 194
           K ++ +T +K G+L+P+ P+L  ND R+LPQT+ G  +TS +  NL  T G LD+ K RD
Sbjct: 129 KARLGSTVVKHGTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQRD 188

Query: 195 DTNYEDIALNNKNSRFVSGATGKHFNFGGADYQFADKITGSYHFAQLDDVYRQHFLGLVA 254
            ++   + L+        G     F+F GADY  + ++  SY   +L+  YRQ F GLV 
Sbjct: 189 SSDSTGLYLDG-----YGGPASGDFSFAGADYAVSKQLRLSYFHGELEHFYRQDFAGLVH 243

Query: 255 SRPMGPGTFGTDLRLAISDDTGAARGGKIDNTSLNGLFSYALNGHKLSAGYQHMSGDSAF 314
             P+G G   TDLR   S D+G A GG IDN   +G  SYA +GH + AGYQ + G++  
Sbjct: 244 DLPLGGGVLTTDLRYFKSRDSGTAYGGGIDNDMFSGQLSYAHSGHTVGAGYQVLDGEAGL 303

Query: 315 PYVDGSDPYLVNFVQINDFAGAEERSWQARYDFDFAKLGIPGLSFMSRYLSGDNIKLKNG 374
           PY+ G+  Y  + V I  F   EE++W A Y ++FA  G+PGL+FM+RYLSGDN +   G
Sbjct: 304 PYISGATVYSFSNVGIGKFIEEEEKTWMASYAYNFAAAGVPGLTFMTRYLSGDNGR-SGG 362

Query: 375 ETGKEWERNSEIKYVVQTGTFKDVAVRLRNATYRSNYSARDADEMRLLVSYSVALW 430
           E  KEWER++EI YVVQ G  K + V+LRN  YRS++ AR  D  RL ++Y +A+W
Sbjct: 363 EGIKEWERDAEIAYVVQGGPLKGLGVKLRNYVYRSDF-ARGRDSNRLYLTYDIAIW 417