Pairwise Alignments

Query, 430 a.a., porin from Pseudomonas simiae WCS417

Subject, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

 Score =  256 bits (655), Expect = 8e-73
 Identities = 166/451 (36%), Positives = 232/451 (51%), Gaps = 56/451 (12%)

Query: 19  QTALASAATLAGFSPLSQAA-FFEDSSATLETRNMYFNRDFRDGTSAQQSKRDEWAQGFM 77
           +++LA A  L   +  + AA F EDS  +L +R MYFN D R+    Q+    E  QGF 
Sbjct: 3   KSSLALAVALGVLAQQAGAAGFVEDSKLSLSSRTMYFNDDNRESGIDQK----ESGQGFK 58

Query: 78  LNLQSGYTDGTVGFGVDALGMLGVKLD----SSPDRTGTGLLPTHDDGRAADEYSKLGLT 133
           L+  SG+T GTVGFGVD   + G+ LD    S PD   T   P+  DG A  +++++G  
Sbjct: 59  LDYLSGFTQGTVGFGVDVQALWGIHLDGGRGSRPDANNT-FFPSDSDGSAVHDWARIGGN 117

Query: 134 GKVKISATELKIGS-LIPELPILKPNDGRILPQTFNGGLITSKEFKNLVFTGGRLDKAKD 192
            K + S TE+  GS L P LPIL  NDGR+LPQTF GG + SKE  NL    G+L  A  
Sbjct: 118 AKARFSKTEVHYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQLTHAMG 177

Query: 193 RDDTNYEDIALNNKNSRFVSGA--TGKHFNFGGADYQFADKITGSYHFAQLDDVYRQHFL 250
           R        A +N+    VSGA      F F G DY+    +T  Y+++ L+D Y+QHFL
Sbjct: 178 R--------ASSNRTGLSVSGAFRDSNKFQFAGGDYKLTPDLTLQYYYSNLEDFYKQHFL 229

Query: 251 GLVASRPMGPG-TFGTDLRLAISDDTG---------------AARGGKIDNTSLNGLFSY 294
           G      +    +F TDLR   S   G               A   G++DN + + +F+Y
Sbjct: 230 GATHVFKIADNQSFKTDLRYFDSSSDGKNGQTGYAFDNNGGYAKNSGEVDNKTWSAMFTY 289

Query: 295 ALNGHKLSAGYQHMSGDSAFPYVD-----------------GSDPYLVNFVQINDFAGAE 337
            L GH L  G+Q +  D  F +++                 G+  YL     IN FA A 
Sbjct: 290 TLGGHALMLGHQQVGDDGGFVWLNQGSVRKDGSTSSLEGNGGASFYLFTDSMINQFARAG 349

Query: 338 ERSWQARYDFDFAKLGIPGLSFMSRYLSGDNIKLKNGE-TGKEWERNSEIKYVVQTGTFK 396
           E +   +Y +DFA LG+PGL     YL GD+++ ++G+ T  EWER++ + Y +Q GT K
Sbjct: 350 ENTTFGQYSYDFAALGVPGLKASVSYLRGDDVRNRSGDGTYNEWERDARVDYTLQEGTLK 409

Query: 397 DVAVRLRNATYR-SNYSARDADEMRLLVSYS 426
            +   LR   YR S  SA D D+ R +V+Y+
Sbjct: 410 GLGFSLRQGVYRGSGESALDKDQTRFIVNYT 440