Pairwise Alignments

Query, 430 a.a., porin from Pseudomonas simiae WCS417

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  250 bits (639), Expect = 5e-71
 Identities = 154/445 (34%), Positives = 220/445 (49%), Gaps = 44/445 (9%)

Query: 22  LASAATLAGFSPLSQAA------FFEDSSATLETRNMYFNRDFRDGTSAQQSK------- 68
           LA+ + L+G   +S  A      F E SS T+  RN YFNRD RD T+   +        
Sbjct: 9   LAAVSALSGSYAISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNTNG 68

Query: 69  -RDEWAQGFMLNLQSGYTDGTVGFGVDALGMLGVKLDSSPDRTGT----GLLPTHDDGRA 123
             + WA   +    SG+T GTVGFGVDA  M+G+KLD+   R G      +LP  + G A
Sbjct: 69  YSEAWAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVLPVDNKGEA 128

Query: 124 ADEYSKLGLTGKVKISATELKIGSLIPELPILKPNDGRILPQTFNGGLITSKEFKNLVFT 183
            DEY+K+G   KV++  T +K+G + P  P++   D R+LP++F G  + +   + L   
Sbjct: 129 RDEYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQGLTLQ 188

Query: 184 GGRLDKAKDRDDTNYEDIALNNKNSRFVSGATGKHF-NFGGADYQFADKITGSYHFAQLD 242
           GGRL        +N     LN+    F  G     +  +GG DY   D  T S + +QL 
Sbjct: 189 GGRLHAMSQPVSSN-----LNDNFVTFYGGPVNSPWIGYGGGDYSINDNWTVSVYASQLK 243

Query: 243 DVYRQHFLGLVASRPMGPGTF---GTDLRLAISDDTGAARGGKIDNTSLNGLFSYALNGH 299
           DV+ Q++ G     P+        G +   A+  D G  R G+ DN   +         H
Sbjct: 244 DVWNQYYAGTSVVYPLSDDLALIGGFNYYKAV--DEGKKRLGEFDNNIWSAKVGVRYGAH 301

Query: 300 KLSAGYQHMSGDSAFPYVDGSDPYLV-NFVQINDFAGAEERSWQARYDFDFAKLGIPGLS 358
            L+  +Q  +GD  F Y+  SD   V N +Q +DF   +ERSW  RYD +F   GIPGL+
Sbjct: 302 TLALSHQRNNGDDDFDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGLT 361

Query: 359 FMSRYLSGDNIKLKNG--------------ETGKEWERNSEIKYVVQTGTFKDVAVRLRN 404
           FM+RY  G      N               +  K WER+ E+KYVVQTG  KD++ RLR 
Sbjct: 362 FMTRYARGSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRLRQ 421

Query: 405 ATYRSNYSARDADEMRLLVSYSVAL 429
           AT R+     D DE R+++ Y +++
Sbjct: 422 ATTRATAFESDLDETRVIIEYPLSI 446