Pairwise Alignments

Query, 327 a.a., tricarboxylic transport membrane protein from Pseudomonas simiae WCS417

Subject, 327 a.a., ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) from Variovorax sp. SCN45

 Score = 93.6 bits (231), Expect = 6e-24
 Identities = 91/327 (27%), Positives = 150/327 (45%), Gaps = 20/327 (6%)

Query: 5   LRKLALAAGCMLFAGQLLAADE--PKRPECIAPASPGGG-FDLTCK-LAQSALVNEKLLS 60
           L   +L A C L A  L A  +  P +P  +  A P GG  D+T + LA +A    K+L 
Sbjct: 8   LSAASLVAACGL-ASPLAAFAQGFPTKPVKLVIAFPAGGPTDITMRQLADNA---SKILG 63

Query: 61  KPMRVTYMPGGVGAVAYNAVVAQRPADAGTLVAWSSGSLLNLAQGKFGRFD--ESAVRWL 118
           +P+ +   PG  G +   A+   +P   G  VA     +  L       +D  +     L
Sbjct: 64  QPVIIDNKPGAGGTLPAQALQTAQPD--GYTVAQIPLGVFRLGYTTKINWDPLKDITYVL 121

Query: 119 AAVGTSYGAIAVKADSPYKTLDDLVKALKKDPGSVVIGSGGTVGSQDWMQTALIAKAAGI 178
              G ++G I V ADSP+KT  D V   K +PG +  GS GT+ S   + T ++A+ AGI
Sbjct: 122 NVTGYAFG-IVVPADSPFKTWADFVAYAKANPGKLTYGSTGTLTSPH-LTTEIVAQKAGI 179

Query: 179 NPRELRYVALEGGGEIATALLGGHIQVGSTDISDSMPHILSGDMRLLAVFSEQRLDEPEM 238
              EL++V  +G  ++  A++ G + + + D +   P + +G +R+L  + ++RL   + 
Sbjct: 180 ---ELQHVPYKGSADLMLAVVSGQL-MAAADSTGFAPQVEAGKLRVLNTWGDKRL--AKF 233

Query: 239 KDIPTAKEQGYDIVWPVVRGFYLGPKVSDADYAWWKDAFDKLLASDEFAKLRDQRELFPF 298
            D PT KE GYD+V     G                DAF + +    +     + ++ P 
Sbjct: 234 PDAPTLKELGYDVVQNSPFGIGAPKGTPPEVVKKLHDAFKQAMEEPSYVAALGRYDMLPN 293

Query: 299 AMTGPELDTYVKKQVADYKVLAKEFGL 325
            M+      + +  V   KV+ ++ GL
Sbjct: 294 YMSSATYTKFAQDTVVREKVVIEKLGL 320