Pairwise Alignments

Query, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  282 bits (722), Expect = 2e-80
 Identities = 165/402 (41%), Positives = 248/402 (61%), Gaps = 4/402 (0%)

Query: 139 QVDQARAQLNTSNNELFRQARELIRVMIESNNRQIKEGAVAADELRNSALTWMISGIVLA 198
           Q   A A + TS  E+  Q  ++++        Q++   + + + R+          +LA
Sbjct: 242 QFRDAVANITTSRAEMTVQGADIVKRSDALYQIQLERRDIESTQARSLQAI----ATLLA 297

Query: 199 FLIAIIIGVLITRLITRPIAQAVQSAQRIAQGDLTQAIITERTDEAGQLLMALSDMQGGL 258
            L+ ++  VLITR ITRP+   + + ++IA GDLTQ +   R DE G L   ++ M   L
Sbjct: 298 LLVGVLAAVLITRQITRPLQDTLVAVEKIASGDLTQHMRVTRRDELGVLQQGIARMGTTL 357

Query: 259 KSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDEIQQAATAVNQMTAAVDEVASNA 318
           +  +  I +   Q+ASAAEELSAVT+++S G   Q  E  Q ATA+++M A V EVA NA
Sbjct: 358 RELISGIRDGVTQIASAAEELSAVTEQTSAGANSQKVETDQVATAMHEMAATVQEVARNA 417

Query: 319 VSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDSTQSVADLAGQVREIGKVIDVIR 378
              S A+  A  EA  G + V +A+  +  +  +++ ST+++  L  + ++IG V+DVI+
Sbjct: 418 EQASHAATGADDEARAGDRVVGEAIGQIERLAEDMHRSTEAMNLLQQESQKIGSVMDVIK 477

Query: 379 GIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQISTVDIEKMIGDVQTGAD 438
            +A+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ ST +IE++I  +Q G  
Sbjct: 478 SVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEELIASLQHGTQ 537

Query: 439 DAVAAMNKSLTWANNTQTLAQNAGEALQRITASVAKINERNLVIASASEEQAQVAREVDR 498
               AM  S    +++  LA+ AG +L+ IT++V+ I   N  IA+A+E+Q+ VA E+ R
Sbjct: 538 QVANAMQGSRALTDSSVELARKAGSSLESITSTVSSIQSMNQQIAAAAEQQSAVAEEISR 597

Query: 499 NLLNIQDLSTQTAAGAHQTNASSQDLSRLATSFNVLVSKFQL 540
           ++LN++D+S QTAA + +T ASS +L+RL      LVS+F++
Sbjct: 598 SILNVRDVSEQTAAASDETAASSVELARLGGQLQTLVSQFRV 639