Pairwise Alignments

Query, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  219 bits (557), Expect = 3e-61
 Identities = 129/363 (35%), Positives = 212/363 (58%), Gaps = 4/363 (1%)

Query: 179 AADELRNSALTWMISGIV-LAFLIAIIIGVLITRLITRPIAQAVQSAQRIAQGDLTQAII 237
           A  + R SA+  M+  +  +A L+ ++I VL++ L T  + +A++      +GDLT+ + 
Sbjct: 284 ALSQFRTSAIIAMLIAVAAIAGLLGLLIPVLMSPLTT--MGRAMRDIAE-GEGDLTRRLA 340

Query: 238 TERTDEAGQLLMALSDMQGGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDEI 297
            +  DE G+L  + +     + +++ E+++A+  +   +E++ + ++ S  G   Q+   
Sbjct: 341 VQNKDEFGELATSFNRFVERIHASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRT 400

Query: 298 QQAATAVNQMTAAVDEVASNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDST 357
              A A+N++ AA  E+A NA   S+ +  A+ +A  GR+ VE+A+S M+++   I++S 
Sbjct: 401 NSVAAAINELGAATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRISESC 460

Query: 358 QSVADLAGQVREIGKVIDVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAH 417
             +  L     EIGK++DVI+GI+ QTNLLALNAAIEAARAGE GRGFAVVADEVR LAH
Sbjct: 461 AQIETLNASTDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAH 520

Query: 418 RTQISTVDIEKMIGDVQTGADDAVAAMNKSLTWANNTQTLAQNAGEALQRITASVAKINE 477
           RTQ S  +I +MI  +Q G+ +AV  MN S   +  T  +A  AGE L  +T  + +I+ 
Sbjct: 521 RTQESAEEIHRMITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDG 580

Query: 478 RNLVIASASEEQAQVAREVDRNLLNIQDLSTQTAAGAHQTNASSQDLSRLATSFNVLVSK 537
            N  +A+A+EEQ  V   ++ ++  I  L+ Q     ++T      L++ A     LV  
Sbjct: 581 MNQSVATATEEQTAVVESLNLDITQINALNQQGVENLNETLRHCDQLAQQAGRLKQLVGS 640

Query: 538 FQL 540
           F++
Sbjct: 641 FRI 643