Pairwise Alignments

Query, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  406 bits (1043), Expect = e-117
 Identities = 252/543 (46%), Positives = 341/543 (62%), Gaps = 12/543 (2%)

Query: 1   MKISTKLLLSFLLCALVTLAVGLLGIKGVVRLSTALELTFSNNLVSVSNTAATLNGLVAH 60
           M I+ + LL F L  L+ L    LGI  +V++    +   +   VSV +    L+ L A 
Sbjct: 6   MNIAPRALLGFALIGLLMLG---LGIFSLVQMGNIRQAGVAIEQVSVPSIKI-LDELTAL 61

Query: 61  NRGL----YRLMDASKGDVSPQDRDRVRQDIAQELKRSQASYATYRATPLEDDERAAGDK 116
           N  +    YRL+   +        D + Q  +Q  +  QA    Y    +  DE+AA D+
Sbjct: 62  NLRMRTLSYRLLLNREPATQRDTLDMLDQRNSQIDRARQA----YLPMIVAADEQAAFDQ 117

Query: 117 LDQIWPTYISSSERIMALLDGGQVDQARAQLNTSNNELFRQARELIRVMIESNNRQIKEG 176
             Q+   Y     R+  L    ++D+ R  LN        Q  +++  ++  N  Q +  
Sbjct: 118 YGQLLNQYRQLESRMRTLSQADRLDELRDLLNRDLLANSEQINKVMDTLVRINTDQTRAT 177

Query: 177 AVAADELRNSALTWMISGIVLAFLIAIIIGVLITRLITRPIAQAVQSAQRIAQGDLTQAI 236
              A      A   +I  +V A ++      L+TR I +PI +A++ A+++A GDLT  I
Sbjct: 178 NEKAANQYAGAFALVIGLLVAATVLTFACAFLLTRSIVKPIEEALKCAEQVADGDLTHVI 237

Query: 237 ITERTDEAGQLLMALSDMQGGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTRQNDE 296
             E TDEA +LL A++ MQ  L+ TL +IA ++ QLASAAEEL+AVTDES+RGL +QN+E
Sbjct: 238 RAEGTDEAARLLRAMARMQDKLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNE 297

Query: 297 IQQAATAVNQMTAAVDEVASNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVEINDS 356
           I+QAATAV +MT+AV+EVA NAVSTSEAS +A+    DGR  V + V  +  M  ++  +
Sbjct: 298 IEQAATAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGAIERMSGDVQAT 357

Query: 357 TQSVADLAGQVREIGKVIDVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA 416
            + +  LA Q R+IGKV+DVIRG+ADQTNLLALNAAIEAARAGE GRGFAVVADEVRALA
Sbjct: 358 AKLITHLAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALA 417

Query: 417 HRTQISTVDIEKMIGDVQTGADDAVAAMNKSLTWANNTQTLAQNAGEALQRITASVAKIN 476
           HRTQ ST +IE+MIG +Q G ++AV +M  S   A +T  +A+ AG AL  I  +VA+IN
Sbjct: 418 HRTQQSTSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQIN 477

Query: 477 ERNLVIASASEEQAQVAREVDRNLLNIQDLSTQTAAGAHQTNASSQDLSRLATSFNVLVS 536
           ERNLVIASA+EEQAQVAREVDRNL+NI DLS Q+A GAHQT+A+S +LSRLA   N LV+
Sbjct: 478 ERNLVIASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVA 537

Query: 537 KFQ 539
           +F+
Sbjct: 538 RFR 540