Pairwise Alignments

Query, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 539 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  238 bits (606), Expect = 6e-67
 Identities = 167/548 (30%), Positives = 284/548 (51%), Gaps = 23/548 (4%)

Query: 1   MKISTKLLLSFLLCALVTLAVGLLGIKGVVRLSTALELTFSNNLVSVSNTAATLNGLVAH 60
           M I+TK+ L   + AL  +   L+ +   +     LE        ++  +A+TL  +   
Sbjct: 7   MPIATKIFLIPGIAALSFIIYLLITVYTALNNGATLEKVQKVQFPALQLSASTLVDM--- 63

Query: 61  NRGLYRLMDASKGDVSPQDRDRVR--QDIAQELKRSQASYATYRATPLEDDERAAGDKLD 118
                ++ D     V+  D D +   Q++A+E K      A+     +  + R+   ++ 
Sbjct: 64  ----QKVRDTLASAVTTGDEDTLTMAQELAEEAKSGLNQIAS-----ISPEFRSEISRIS 114

Query: 119 QIWPTYISSSERIMALLDGGQVDQAR-AQLNTSNNELFRQARELIRVMIESNNRQIKEGA 177
             +  Y   +  +   +  G  D +R  +L+   N+ +  A   +    ++     +E  
Sbjct: 115 SGFDNYFDVAYDVSQSMVNGTADFSRLGELSAQMNQSYDGAIAAMSQFRDAQQAAFEEAF 174

Query: 178 VAADELRNSALTWMISGIVLAFLIAIII---GVLITRLITRPIAQAVQSAQRIAQ--GDL 232
              D    S ++   +G++LA ++ I++    V I R I + I   V+S + IAQ  GDL
Sbjct: 175 KNTDSANTSLIS---TGVILAVVVTILLFGTAVPIVRGIKQSIDDVVRSLKDIAQENGDL 231

Query: 233 TQAIITERTDEAGQLLMALSDMQGGLKSTLVEIANASDQLASAAEELSAVTDESSRGLTR 292
           T  I T+  DE G+L+   +     L+  + ++  AS  L++ A+ L  VT+E+ R +  
Sbjct: 232 TVRIETKSEDEIGELVYWFNQFMDKLQGVVRDVVEASLPLSNLAQNLRGVTEETQRTIDV 291

Query: 293 QNDEIQQAATAVNQMTAAVDEVASNAVSTSEASRQATTEAEDGRQQVEQAVSGMSSMVVE 352
           Q      A  AV+ M+ +VD VA +A   +  + +ATT A +GRQ V+Q V+ +  +   
Sbjct: 292 QQKSATNAKRAVDTMSGSVDGVAHSAAQAASDANEATTAAREGRQIVQQTVTSIQQLAEN 351

Query: 353 INDSTQSVADLAGQVREIGKVIDVIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEV 412
           + ++   +A L     ++G V+DVI+GIA+QTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 352 VRETADVIARLESDSNKVGSVLDVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 411

Query: 413 RALAHRTQISTVDIEKMIGDVQTGADDAVAAMNKSLTWANNTQTLAQNAGEALQRITASV 472
           R LA RTQ ST +I+  I  +Q  A  AV  M++    A ++   A  AG +L+ IT+++
Sbjct: 412 RTLASRTQQSTEEIQSTIEQLQNAAHSAVEVMSRGTEQATSSVETANKAGSSLETITSTI 471

Query: 473 AKINERNLVIASASEEQAQVAREVDRNLLNIQDLSTQTAAGAHQTNASSQDLSRLATSFN 532
            +IN+ N  IA  +E+Q  VA ++ R++  I + + QTA+ + +  +   +L+ LA    
Sbjct: 472 GRINQMNEQIAHNTEDQRTVAVDIVRHVDEIHERTEQTASRSGELGSMCNELADLAQHLE 531

Query: 533 VLVSKFQL 540
            +  +F++
Sbjct: 532 SIAKQFRV 539