Pairwise Alignments

Query, 394 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 424 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 75.1 bits (183), Expect = 4e-18
 Identities = 87/384 (22%), Positives = 154/384 (40%), Gaps = 21/384 (5%)

Query: 14  RTLIAGCSAHAVHDGLTDVIYVLLPIWQAQFALSYAQIGLLRGAYSGMMAVFQLMASRAA 73
           RT++A  S       L   +  ++P    +F+++ AQ  L+    + M+A+  L+    +
Sbjct: 38  RTVLALFSGGFATFALLYCVQPMMPALSHEFSINAAQSSLILSVSTAMLALGLLITGPIS 97

Query: 74  KRWGRVPMLVGGTALAGAAYVLAGQATGLTMLLMALMLGGLGASTQHPLASSMISDAYED 133
              GR P++V     A  A + +G       +L    L GL  S    +A + +S+    
Sbjct: 98  DTLGRKPVMVAALFCAAFATIASGLMPSWEGILFMRALVGLSLSGLAAVAMTYLSEEIHP 157

Query: 134 GGGIKQALSQYNFSGDIGKTLVPGLVGLLLTVIGWRASATFLGWLGLAAAGLLWWLIPSQ 193
              I  A+  Y     IG      ++G+L+  + W  +   +G L L AA + W ++P  
Sbjct: 158 -QHIGLAMGLYIGGNAIGGMSGRLIIGVLIDFVSWHTAMLIIGALALIAATVFWKILPES 216

Query: 194 SRPSAAPQKTKSPIGT----GSTTGLRALILTGTLDSAVRMGFLTFLPFLLAAK--GAGT 247
               A+  K +S + +        GL  L L   L     +    ++ + L A       
Sbjct: 217 RNFRASSLKPRSLVDSFVMHFKDAGLPWLFLEAFLLMGAFVTMFNYIGYRLLADPYDLSQ 276

Query: 248 AGIGLALTLLFIGGAFGKLFCGYLGARIGMMRTVWLTESSTALLIVAAVYLPLTGLMVML 307
           A +GL L+L+++ G +     G L  R+G  R +W T       ++  ++ PL  ++  +
Sbjct: 277 AVVGL-LSLVYLSGIYSSAKIGSLADRLGRRRVLWATIVLMLAGMLLTLFSPLWLVVPGM 335

Query: 308 PLLGLVLNGTSSVLYGAVPDLAGAEKREQAFAVFY--------TGTIGGGALAPVVFGGV 359
            +      G  SV    +   A   K + +    +         GT GG       + G+
Sbjct: 336 LIFTFGFFGAHSVASSWIGRRAVKAKGQASSLYLFCYYVGSSIAGTAGGFFWHFAGWNGI 395

Query: 360 GDALGVPVAVMVLAGVLLVTLPLA 383
           G  +     V +L G LLV L LA
Sbjct: 396 GAFI-----VALLMGALLVALKLA 414



 Score = 34.3 bits (77), Expect = 7e-06
 Identities = 34/166 (20%), Positives = 66/166 (39%), Gaps = 10/166 (6%)

Query: 231 GFLTF---------LPFLLAAKGAGTAGIGLALTLLFIGGAFGKLFCGYLGARIGMMRTV 281
           GF TF         +P L        A   L L++     A G L  G +   +G    +
Sbjct: 47  GFATFALLYCVQPMMPALSHEFSINAAQSSLILSVSTAMLALGLLITGPISDTLGRKPVM 106

Query: 282 WLTESSTALLIVAAVYLPL-TGLMVMLPLLGLVLNGTSSVLYGAVPDLAGAEKREQAFAV 340
                  A   +A+  +P   G++ M  L+GL L+G ++V    + +    +    A  +
Sbjct: 107 VAALFCAAFATIASGLMPSWEGILFMRALVGLSLSGLAAVAMTYLSEEIHPQHIGLAMGL 166

Query: 341 FYTGTIGGGALAPVVFGGVGDALGVPVAVMVLAGVLLVTLPLAWGV 386
           +  G   GG    ++ G + D +    A++++  + L+   + W +
Sbjct: 167 YIGGNAIGGMSGRLIIGVLIDFVSWHTAMLIIGALALIAATVFWKI 212