Pairwise Alignments

Query, 394 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 397 a.a., membrane efflux protein from Variovorax sp. SCN45

 Score = 87.8 bits (216), Expect = 5e-22
 Identities = 101/385 (26%), Positives = 159/385 (41%), Gaps = 18/385 (4%)

Query: 9   VSTRRRTLIAGCSAHAVHDGLTDVIYVLLPIWQAQFALSYAQIGLLRGAYSGMMAVFQLM 68
           ++ RR  L+ G   HAV+D    ++  LLP    +   SY  +  L  A +G+ +V Q +
Sbjct: 1   MNKRRLGLLTG--THAVNDLYQGLVPALLPFMVLERGYSYTAVAGLMLAATGLSSVVQPL 58

Query: 69  ASRAAKRWGRVPMLVGGTALAGAAYVLAGQATGLTMLLMALMLGGLGASTQHPLASSMIS 128
               A R  R  ++  G  +A    VLAG +    +  +A++L GLG +  HP A+    
Sbjct: 59  FGLYADRHPRGWLVPTGFLVAALGVVLAGLSQSYLLTWIAMVLCGLGIAAYHPPATVAAR 118

Query: 129 DAYEDGGGIKQALSQYNFSGDIGKTLVPGLVGLLLTVIGWRASATFLGWLGLAAAGLLWW 188
            A   GG  ++A+S ++  G IG +  P L   +  V G   S ++L  +   A G++W 
Sbjct: 119 AA---GGASQKAMSVFSVGGTIGASFAPVLAATV--VGGGSLSRSYLLGVPALAMGVVWM 173

Query: 189 LIPSQSRPSAAPQKTKSPIGTGSTT--------GLRALILTGTLDSAVRMGFLTFLPFLL 240
           +  + S  ++A     +    G               L+LT    S   +  L+ L   +
Sbjct: 174 VANAGSGAASAASAAAAARKAGGQVLKPHNDWRAFSLLVLTIIGWSIPYVTVLSMLSLRI 233

Query: 241 AAKGAGTAGIG-LALTLLFIGGAFGKLFCGYLGARIGMMRTVWLTESSTALLIVAAVYLP 299
                GTA  G  ALT     GA G L  G+LG RIG M T+          +   V  P
Sbjct: 234 TRDLHGTAFQGAAALTSFTAAGAVGTLLGGWLGDRIGRMGTIRAGYLFALPSLAGVVLAP 293

Query: 300 LTG-LMVMLPLLGLVLNGTSSVLYGAVPDLAGAEKREQAFAVFYTGTIGGGALAPVVFGG 358
             G  +    LLG+ +    +       D         +          GG ++P +FG 
Sbjct: 294 NAGWALACTALLGMCMFLPFAAQVTLAQDYLPRNPATASGITLGLALSVGGLVSP-LFGM 352

Query: 359 VGDALGVPVAVMVLAGVLLVTLPLA 383
           + DA G+ V +  +  VL V   LA
Sbjct: 353 LSDARGLGVTLTAVLCVLCVATVLA 377