Pairwise Alignments

Query, 394 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 409 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score = 67.4 bits (163), Expect = 7e-16
 Identities = 74/270 (27%), Positives = 110/270 (40%), Gaps = 16/270 (5%)

Query: 37  LPIWQAQFALSYAQIGLLRGAYSGMMAVFQLMASRAAKRWGRVPMLVGGTALAGAAYVLA 96
           LPI  A        + +    Y   +AV QL+    A R+GR P+L+ G A+   A + A
Sbjct: 38  LPIAAANLGAGIGAMQMTVSLYIFGLAVGQLVYGPLADRFGRRPVLLCGLAIYCVAGLAA 97

Query: 97  GQATGLTMLLMALMLGGLGASTQHPLASSMISDAYEDGGGIKQALSQYNFSGDIGKTLVP 156
             A  +  L+ A +   +G      L  S++ D  E     ++ L+  N    IG +L P
Sbjct: 98  ALAPEVHALITARLFQAIGGCAGLVLGRSIVRDTAEPQEATRR-LALMNLMVTIGPSLAP 156

Query: 157 GLVGLLLTVIGWRASATFLGWLGLAAAGLL--WWLIPSQSRPSAAPQKTKSPIGTGSTTG 214
            + G L T +GWR  + F    GL   G L  W ++P    P AA          G    
Sbjct: 157 LIGGALATALGWR--SIFYALFGLGVVGFLFTWRMLPETGAPGAAVNARDLARNYGKLLR 214

Query: 215 LRALI---LTGTLDSAVRMGFLTFLPFLLA---AKGAGTAGIGLALTLLFIGGAFGKLFC 268
             A +   + G   +     F+   PF+      + A  AGI LA  +L  G   G    
Sbjct: 215 SPAFLGFSVGGGCATTSMYAFIASAPFIFVDQLHRPAHEAGIYLA--ILVSGVWLGSFLT 272

Query: 269 GYLGARIGMMRTVWLTESSTALLIVAAVYL 298
            +L +R+ + R   L   S AL + AA  L
Sbjct: 273 SHLISRVRVDR---LMIRSNALSVAAAFVL 299



 Score = 42.0 bits (97), Expect = 3e-08
 Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 6/172 (3%)

Query: 215 LRALILTGTLDSAVRMGFLTFLPFLLAAKGAGTAGIGLALTLLFIGGAFGKLFCGYLGAR 274
           L  +  +GTL   +   F+  LP   A  GAG   + + ++L   G A G+L  G L  R
Sbjct: 20  LALVTFSGTLAMHI---FVPALPIAAANLGAGIGAMQMTVSLYIFGLAVGQLVYGPLADR 76

Query: 275 IGMMRTVWLTESSTALLIVAAVYLPLTGLMVMLPLLGLVLNGTSSVLYG--AVPDLAGAE 332
            G    +    +   +  +AA   P    ++   L    + G + ++ G   V D A  +
Sbjct: 77  FGRRPVLLCGLAIYCVAGLAAALAPEVHALITARLF-QAIGGCAGLVLGRSIVRDTAEPQ 135

Query: 333 KREQAFAVFYTGTIGGGALAPVVFGGVGDALGVPVAVMVLAGVLLVTLPLAW 384
           +  +  A+       G +LAP++ G +  ALG       L G+ +V     W
Sbjct: 136 EATRRLALMNLMVTIGPSLAPLIGGALATALGWRSIFYALFGLGVVGFLFTW 187