Pairwise Alignments

Query, 394 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 404 a.a., fosmidomycin efflux system from Pseudomonas putida KT2440

 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 103/397 (25%), Positives = 158/397 (39%), Gaps = 29/397 (7%)

Query: 4   AVAMPVSTRRRTLIAGCS-AHAVHDGLTDVIYVLLPIWQAQFALSYAQIGLLRGAYSGMM 62
           A A   S     +I  C+ AH ++D +  V+  + P+ +A + LS+AQIG++   +    
Sbjct: 13  AAASQASPMVMRIIGFCALAHLINDLIQSVLPAIYPMLKANYDLSFAQIGMITLTFQITA 72

Query: 63  AVFQLMASRAAKRWGRVPMLVGGTALAGAAYVLAGQATGLTMLLMALMLGGLGASTQHPL 122
           ++ Q        R     +L  GT       V+        M+L+A  L G+G+ST HP 
Sbjct: 73  SLLQPWVGFFTDRRPTPNLLPLGTLCTLVGIVMLAFVGSFPMILLASALVGIGSSTFHPE 132

Query: 123 ASSMISDAYEDGGGIKQALSQYNFSGDIGKTLVPGLVGLLLTVIGWRASATFLGWLGLAA 182
            S +   A   GG    A S +   G+ G  L P L   ++   G     T + W GLA 
Sbjct: 133 TSRIARLA--SGGRFGLAQSTFQVGGNTGSALGPLLAAAIVIPFG----QTHVAWFGLAG 186

Query: 183 AGLL--------WWLIP-SQSRPSAAPQKTKSPIGTGSTTGLRALILTGTLDSA---VRM 230
              L        W+    +Q++   A Q T    G      + ALI+ G L  +      
Sbjct: 187 LFFLGVTLMLRGWYKEHLNQAKARKAVQATH---GISRNRVIAALIVLGLLVFSKYFYMA 243

Query: 231 GFLTFLPFLLAAK-GAGTAGIGLALTLLFIGGAFGKLFCGYLGARIGMMRTVWLTESSTA 289
            F ++  F L  K G   A   L L L     A G  F G +G RIG    +W +    A
Sbjct: 244 SFTSYFTFYLIEKFGVSVASSQLHLFLFLGAVAAGTFFGGPIGDRIGRKAVIWFSILGVA 303

Query: 290 LLIVAAVYLPLTGLMVMLPLLGLVLNGTSSVLYGAVPDLAGAEKREQAFAVFYTGTIGGG 349
              +A  Y  L    V+  ++G +L    S +     +L        A  +F+    G G
Sbjct: 304 PFTLALPYADLFWTTVLSVVIGFILASAFSAIVVYAQELVPGSVGMIA-GIFFGLMFGFG 362

Query: 350 ALAPVVFGGVGDALGVP-----VAVMVLAGVLLVTLP 381
            +   + G V D  G+       + + L G+L V LP
Sbjct: 363 GIGAALLGYVADLRGIEYVYGLCSFLPLFGLLAVLLP 399