Pairwise Alignments

Query, 387 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 424 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  137 bits (346), Expect = 4e-37
 Identities = 94/371 (25%), Positives = 161/371 (43%), Gaps = 7/371 (1%)

Query: 10  LALFLCGCAAFLNLYATQSILQTFATQFHISAKMAGWSITVTTLAVAITAPFVSRLTGRF 69
           LALF  G A F  LY  Q ++   + +F I+A  +   ++V+T  +A+       ++   
Sbjct: 41  LALFSGGFATFALLYCVQPMMPALSHEFSINAAQSSLILSVSTAMLALGLLITGPISDTL 100

Query: 70  ELRTVISVAALLLAVPALMTAYADSFAEVLVWRFVEGMLIPVVFATSVAYIGDRWRGGTV 129
             + V+  A    A   + +    S+  +L  R + G+ +  + A ++ Y+ +      +
Sbjct: 101 GRKPVMVAALFCAAFATIASGLMPSWEGILFMRALVGLSLSGLAAVAMTYLSEEIHPQHI 160

Query: 130 TEVTSLYVAGTVLGGFAGRFVTGVMTEYAGWREAFELLAVLSLTVGGFIQFLLPASHG-- 187
                LY+ G  +GG +GR + GV+ ++  W  A  ++  L+L        +LP S    
Sbjct: 161 GLAMGLYIGGNAIGGMSGRLIIGVLIDFVSWHTAMLIIGALALIAATVFWKILPESRNFR 220

Query: 188 ----RPLRGETAFSAVFRKPLLA-AYAVGFCVLFSQVAAFTYAGLYLGLPPFGLGPAALG 242
               +P     +F   F+   L   +   F ++ + V  F Y G  L   P+ L  A +G
Sbjct: 221 ASSLKPRSLVDSFVMHFKDAGLPWLFLEAFLLMGAFVTMFNYIGYRLLADPYDLSQAVVG 280

Query: 243 TLYTVFLLALIVIPVAGRLSKSRPHAELLSVAAGLGISGSALTLVPSLWCIVVGLALSST 302
            L  V+L  +      G L+       +L     L ++G  LTL   LW +V G+ + + 
Sbjct: 281 LLSLVYLSGIYSSAKIGSLADRLGRRRVLWATIVLMLAGMLLTLFSPLWLVVPGMLIFTF 340

Query: 303 GVFLAQAAANAFTAATAGDNKAGAVGMYLTCYYLGGSCGAIVPALIWERWGWAGCVTLII 362
           G F A + A+++    A   K  A  +YL CYY+G S         W   GW G    I+
Sbjct: 341 GFFGAHSVASSWIGRRAVKAKGQASSLYLFCYYVGSSIAGTAGGFFWHFAGWNGIGAFIV 400

Query: 363 AFQILTLLIAL 373
           A  +  LL+AL
Sbjct: 401 ALLMGALLVAL 411