Pairwise Alignments

Query, 387 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 394 a.a., putative transporter from Escherichia coli BL21

 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 97/380 (25%), Positives = 158/380 (41%), Gaps = 32/380 (8%)

Query: 16  GCAAFLNLYATQSILQTFATQFHISAKMAGWSITVTTLAVAITAPFVSRLTGRFELRTVI 75
           G A   N YA Q +L T A  F +SA  AG+ +T   L  A    F+  L   FE R +I
Sbjct: 21  GLAVASNYYA-QPLLDTIARNFSLSASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLI 79

Query: 76  SVAALLLAVPALMTAYADSFAEVLVWRFVEGM--LIPVVFATSVAYIGDRWRGGTVTEVT 133
               LL A   L+TA + S A +++   + G+  ++  +     A +    + G   +V 
Sbjct: 80  VSMTLLAAGGMLITASSQSLAMMILGTALTGLFSVVAQILVPLAATLASPDKRG---KVV 136

Query: 134 SLYVAGTVLGGFAGRFVTGVMTEYAGWREAF----ELLAVLSLTVGGFIQFLLPASH-GR 188
              ++G +LG    R V G++    GWR  F     L+A+++L +   +  +   +H   
Sbjct: 137 GTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASVLMALMALALWRGLPQMKSETHLNY 196

Query: 189 PLRGETAFSAVFRKPLLAAYAVGFCVLFSQVAA-FTYAGLYLGLPPFGLGPAALGTLYTV 247
           P    + FS      +L   A+  C+ F+  +  +T     L  PPF      +G     
Sbjct: 197 PQLLGSVFSMFISDKILRTRALLGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLA 256

Query: 248 FLL-ALIVIPVAGRLSKSRPHAELLSVAAGLGISGSAL----TLVPSLWCIVVGLALSST 302
               AL   P  G   K + H         L +S  A+    T V +L   ++ L L+  
Sbjct: 257 GAAGALGARPAGGFADKGKSHHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQ 316

Query: 303 GVFLAQAAA------NAFTAATAGDNKAGAVGMYLTCYYLGGSCGAIVPALIWERWGWAG 356
           GV +           +A    TAG         Y+T Y++GG+ G+++ A  W+  GWAG
Sbjct: 317 GVHITNQTVIYRIHPDARNRLTAG---------YMTSYFIGGAAGSLISASAWQHGGWAG 367

Query: 357 CVTLIIAFQILTLLIALTGW 376
                    ++ LL+   G+
Sbjct: 368 VCLAGATIALVNLLVWWRGF 387