Pairwise Alignments

Query, 397 a.a., carnitine dehydratase from Pseudomonas simiae WCS417

Subject, 406 a.a., putative CoA-transferase family III from Pseudomonas putida KT2440

 Score =  227 bits (579), Expect = 4e-64
 Identities = 141/405 (34%), Positives = 218/405 (53%), Gaps = 15/405 (3%)

Query: 5   LSGIKVVEIGTLIAAPFAARMMAEFGAEVIKIEAMGQGDPLRKWR----KLHEGT----S 56
           LS ++V+++  ++A P++ +++A+ GA+VIK+E  G GD  R W     K  EG     +
Sbjct: 4   LSHLRVLDLSRVLAGPWSGQILADLGADVIKVERPGSGDDTRSWGPPFLKDVEGEDTSEA 63

Query: 57  LWWYLQSRNKKSLALDLKSPEGLDLIKQLLGDADVLIENLRPGGLEKLGLGWDVLHALNP 116
            ++   +RNK+S+ +D   PEG  L+++L    D++IEN + GGL   GL +  L A+NP
Sbjct: 64  AYYLSANRNKRSVTIDFTQPEGQRLVRELAAKCDIVIENFKVGGLAAYGLDYQSLKAVNP 123

Query: 117 KLTLVRISGYGQTGPYRDRPGFGAIGEAMGGIRYTTGNPD----SPPARVGVSLGDSLAS 172
           +L    I+G+GQTGPY  R G+  + + +GG+   TG P+    + P +VGV+L D L  
Sbjct: 124 QLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGEEGAGPVKVGVALTDILTG 183

Query: 173 LHGVIGALMSLLRVKTGQGDGQIVDVSLAESVFNLMESLVPEYDMLGHVRERSGGALPGI 232
           L+  + A+++ L  +   G GQ VD++L +     + +    Y   G    R G A P I
Sbjct: 184 LYSAV-AMLAALAHRDQTGVGQHVDMALLDVQVACLANQAMNYLTTGTPPRRLGNAHPNI 242

Query: 233 APSNTYLTADGAYVVIAGNSDPIYKRLMTTIGRADLAEAPEFVHNDGRAAKSGLLDAAIT 292
            P   + TADG +++  GN D  +++     G+   AE P FV N  R A    L   I 
Sbjct: 243 VPYQDFPTADGDFILTVGN-DSQFRKFAEVAGQPQWAEDPRFVTNKLRVANRAELIPLIR 301

Query: 293 HWTSSRPIEQVLSALEAAEVPAGRIYSVADIVSDPHYQARDMLLNAELPGGVSVKMPGIV 352
             T  +   + ++ LEAA VP G I ++A +  DP   AR + LN   P   SV      
Sbjct: 302 QATVFKTTAEWVAQLEAAGVPCGPINNLAQMFQDPQVLARGLALNIPHPLAGSVPQVASP 361

Query: 353 PKLSETPGGVNWQGPTLGQHTDDILGS-LGLTGADIQRLKTAGVV 396
            +LSETP       P LG+HT+ +LG  LGL   ++QRL+ AGV+
Sbjct: 362 IRLSETPVEYRRAPPLLGEHTEVVLGEVLGLDAGEVQRLRDAGVL 406