Pairwise Alignments

Query, 395 a.a., MFS transporter from Pseudomonas simiae WCS417

Subject, 406 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

 Score =  125 bits (314), Expect = 2e-33
 Identities = 106/373 (28%), Positives = 169/373 (45%), Gaps = 21/373 (5%)

Query: 19  VGISSYLPAVPAIARSLPAAEGHVALALAIYLVGMALPMLLWGHLSERFGRKPVLLAALA 78
           V   SYLPA+PAIA+ L    G  + +L ++++      LL G L++RFGR+PVLLA L 
Sbjct: 28  VATDSYLPALPAIAKEL----GSASTSLTLFVLAFGFAQLLCGPLADRFGRRPVLLAGLG 83

Query: 79  VYALASAAIPSAFNVEAFLALRLVQGLGAGGVSVMARVLVRDSFSG----ALLAKGLSWL 134
            Y LA+     A +V      R +QG     + V +R  VRD +       ++A+GL+ L
Sbjct: 84  CYVLAALGGAFADSVALLAGWRALQGFSMAAILVCSRAAVRDLYPAHEGPHVMARGLTGL 143

Query: 135 GMTFVIALGIGQFAGSLLQVILGWEAIFYGLAIGALGLMLVLQRVMFPALVK--ADESLS 192
           G+  ++A       G+ L    GW  +   +A+ A  ++  +    F    K   ++ LS
Sbjct: 144 GVVGLLA----PLLGAWLVQGAGWRWVMVAMAVYA-SVLFAMCWYSFAETRKPMGEDGLS 198

Query: 193 AWR-IYATIVRHPPFLYPALAGGLGYGVIIAFNTCAPLILQGRFEWSAAQYGGLGWPISA 251
           A R    T+     F   A      YG +  F   +P++  G   WS A YG +    S 
Sbjct: 199 APRGSTRTVFASRSFRAWASVAASTYGGLFCFLLLSPMVYIGYLGWSPAWYGWIPAGGSL 258

Query: 252 AYLAGALMVNRFVARSGRLTMMGWGVALLLTGTAVMLLGSVFAGGLAILLWLPYCVAVLG 311
            Y+    M    + R G +  +  G +L +TG  +  LG       A+ L   + V  LG
Sbjct: 259 VYIFSTTMCRTLLRRYGPVRTVRLGASLSITGAVIQALGCWLMPLSAVPLLFGHAVYCLG 318

Query: 312 QSMSYPISLSVANDESPVSGSYAMALSGFMHQLMAALIGGMASLLV----SQQAWSLAAL 367
             +  P   + A  + P     A++ SGF   ++A  +G +A+  V    S  AW +  +
Sbjct: 319 HGIHQPCGQAGAVGDLPHLAGRAVSWSGFGMMMVAFCVGQLAARFVDADYSYGAWPM-VV 377

Query: 368 CMALAGAAWVCVA 380
            M LAG + + +A
Sbjct: 378 PMLLAGISLMAIA 390