Pairwise Alignments

Query, 175 a.a., DNA-binding protein from Pseudomonas simiae WCS417

Subject, 182 a.a., DNA-binding transcriptional repressor PuuR-putrescine from Pseudomonas putida KT2440

 Score = 81.3 bits (199), Expect = 9e-21
 Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 5/169 (2%)

Query: 4   RLKLLRKKLGVTLEALAEKSGMTKSYLSKVERGLNTPSIAAALKLAKALNVKVEELFSED 63
           RL+ +RK  G++   LA+++G+T S +S +E+   +PSI++  K+   + + + E FS +
Sbjct: 6   RLQAIRKLKGLSQRELAKRAGVTNSTISMIEKNSVSPSISSLRKVLSGIPMSMVEFFSVE 65

Query: 64  SVSLDSYSLV-RSHERPDTSPGYAV--LAHQVSERSLLPFI--IYPPAEFTDKTFKEHLG 118
                   +V ++HE  D S G     L  +      + F+  +YPP   T      H G
Sbjct: 66  LEPQSPTQIVYKAHELIDISDGAVTMKLVGKSHPNRAIAFLTEVYPPGADTGAEMLTHDG 125

Query: 119 EEFLFVHEGQVEVDFMNERVILERGDALHFNAQKPHRLRSVGDVQAQLL 167
           EE   + EG++E+   NE  +LE GD+ +F + +PHR R+  D  A+L+
Sbjct: 126 EETGILLEGRLELVVGNEIFVLEEGDSYYFESTRPHRFRNPFDQPARLI 174