Pairwise Alignments

Query, 357 a.a., beta-lactamase from Pseudomonas simiae WCS417

Subject, 409 a.a., Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily from Variovorax sp. SCN45

 Score = 70.9 bits (172), Expect = 6e-17
 Identities = 70/297 (23%), Positives = 116/297 (39%), Gaps = 30/297 (10%)

Query: 57  IRTDALLVIRDGQVIYERYATPTTASTPHLTWSVSKSLMATVLGVAYGENRFKLTDPAAR 116
           I  D  +V+  G+++YERY         H+  SV+KS++ TV  +   +          R
Sbjct: 94  IHADGAVVLHRGRIVYERYFGALDEHGQHMAMSVTKSVVGTVGAMLAADGTLDEHAAVTR 153

Query: 117 FYPPM--KQHPTVTMADLLHWASGLDWQEDY---EYAPLKSSVVAMLYTR-----GRGDM 166
           + P +        T+  ++   +G+D+ E+Y   +    K +    L  R     G    
Sbjct: 154 YIPELAASAFGQATVRQVMDMTTGIDYSEEYANPDAGVWKHARAGELLPRPAGYAGAEGY 213

Query: 167 ADFAADTEAATAPGQVFRYSSGDTNILSATLKGMLGH---KAYMSSPWDALFKPLGIRNA 223
             F    +     G+ F Y + +T++L   +    GH   K      W  +      ++A
Sbjct: 214 RQFLQTVQGQGTHGEAFAYRTVNTDVLGWLISRATGHPVAKVLSELIWSRIGAE---QDA 270

Query: 224 TWETDADETFVASSYAYLTARDLARVGLLMARDGRWGEHQLLPKDWVAFNRQPFDKYK-- 281
           ++  D      A        RDLAR+G  M   G +   Q++P+  VA  R   D  +  
Sbjct: 271 SFALDGQGAEFAGGGLCTGLRDLARLGETMRLGGFFNGAQIVPEAVVADIRNGADPARFA 330

Query: 282 -AGQDEAVPGGH---WWLNQGAPRPWPDAPADTFAALGHWGQALFVMPEEHLVIVRY 334
            AG        +   WW+   A R        TF A G  GQAL + P   +V+ R+
Sbjct: 331 LAGYTRLAGWSYRNMWWVAHDAHR--------TFTAQGIHGQALHIDPTAEMVVARF 379



 Score = 24.3 bits (51), Expect = 0.006
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 45  AFPARDDATRQGIRTDALLVIRDGQVIYERYATPTTASTPHLTWSV 90
           A  A    T QGI   AL +    +++  R+A+   A+  HL  S+
Sbjct: 349 AHDAHRTFTAQGIHGQALHIDPTAEMVVARFASHPLAANAHLPTSM 394