Pairwise Alignments

Query, 388 a.a., arabinose transporter permease from Pseudomonas simiae WCS417

Subject, 388 a.a., MFS transporter from Pseudomonas simiae WCS417

 Score =  335 bits (859), Expect = 1e-96
 Identities = 180/371 (48%), Positives = 247/371 (66%), Gaps = 1/371 (0%)

Query: 5   LLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMALATAK 64
           L+ LA+ AF IG TEF  MG+LP +A DLGVSIP AG LV+ YALGV +GAP M L T K
Sbjct: 7   LVALAVGAFGIGVTEFAPMGMLPTIANDLGVSIPTAGLLVSAYALGVLLGAPLMILTTGK 66

Query: 65  LPRKAALVALMGIFIIGNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAANLVPANK 124
           +PR+  LV LM IF +GN++ ALA+ Y  L+ ARV+T+L HGAFFG+GS+VAA++V  +K
Sbjct: 67  IPRRHLLVGLMAIFTLGNVMSALATGYYDLLIARVITSLNHGAFFGVGSIVAASVVAPDK 126

Query: 125 RASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVVALIGLIRFLPAKRDE 184
           RA AVA MF GLTLA + GVPL T  G+  GWR+ FW +  +G+V ++ L   LP     
Sbjct: 127 RAGAVAAMFMGLTLATIGGVPLATWFGELLGWRTAFWGIGGLGLVTMVALWFALPNLPLP 186

Query: 185 EKLDMRAELAALKGAGIWLSLSMTALFAASMFTLFTYVAPLLGDVTGVSPKGVTWTLLLI 244
           +   + AE+  L    +  +L++T + +++MFT+FTY+AP+L + T  S   +T  L+L 
Sbjct: 187 KSDGVLAEIKVLGRGSVLAALALTVVGSSAMFTVFTYIAPILSNETHASTPFITAMLVLF 246

Query: 245 GLGLTVGNIIGGKLADKRLAATLIGVFISMAVVSTALTWTSVAVIPTEITLFLWATASFA 304
           G+GLT+GNI GGK AD+ +  TLI    ++ +V  A  +     IP  +++ +W  ASFA
Sbjct: 247 GVGLTLGNIWGGKAADRSIDRTLIVSLSALILVLLAFAFLMRWPIPAAVSILIWGIASFA 306

Query: 305 AVPALQINVVTFGKAAPNLVSTLNIGAFNIGNALGAWVGGSVIAHGFGLTRVPLAAAVLA 364
            VP LQ+ V+   K APNL S +NIGAFN GNA+GA VGG+VI  G G   + LA A +A
Sbjct: 307 VVPPLQMRVMEAAKDAPNLASAVNIGAFNFGNAIGAAVGGAVINAGLGYPAISLAGAAMA 366

Query: 365 ILALLVTLITF 375
            L LL+ ++TF
Sbjct: 367 GLGLLM-VVTF 376