Pairwise Alignments

Query, 388 a.a., arabinose transporter permease from Pseudomonas simiae WCS417

Subject, 385 a.a., MFS transporter from Pseudomonas simiae WCS417

 Score =  174 bits (442), Expect = 3e-48
 Identities = 112/374 (29%), Positives = 194/374 (51%), Gaps = 4/374 (1%)

Query: 1   MPLSLLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMAL 60
           M   +L+L+ + F + TTEFVI+GLLP +A DL VS+  AG LVT +A  VA   PF+  
Sbjct: 1   MLFPILLLSAAGFTVLTTEFVIVGLLPSIARDLNVSVSQAGLLVTLFAFTVAAFGPFLTA 60

Query: 61  ATAKLPRKAALVALMGIFIIGNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAANLV 120
             A+ PRK   ++++ +F + N + ALA +  V+  AR++ AL    F+ + S  A ++V
Sbjct: 61  YCARFPRKRLFISILILFGVANTVAALAPNIWVMALARLIPALGLPVFWALASETAVDIV 120

Query: 121 PANKRASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVVALIGLIRFLPA 180
                  A+  +  G+  A V G+P+GT +    GWR+ F  + V+ +   + L  +LP 
Sbjct: 121 GPEFAGRAIEKIGFGIVCATVFGIPVGTLIADMFGWRAAFAILAVVALAKALLLFIYLPV 180

Query: 181 KRDE-EKLDMRAELAALKGAGIWLSLSMTALFAASMFTLFTYVAPLLGDVTGVSPKGVTW 239
            + + +++ +R++   L+   +   + ++ L  + MFT +TY+A +L  + G     V W
Sbjct: 181 TQPKNDEVTLRSQFKILRNPLMQGHILLSILVFSGMFTAYTYLADILERLAGFDGTLVGW 240

Query: 240 TLLLIGLGLTVGNIIGGKLADKR-LAATLIGVFISMAVVSTALTWTSVAVIPTEITLFLW 298
            L+  G    +GN +GG+  D+  L A+++     +A +  AL     + I     + +W
Sbjct: 241 CLMGFGAVGLIGNSLGGRAVDRHPLIASMVFCGFMIAGM-VALVPAIHSTIGLAAAMAVW 299

Query: 299 ATASFAAVPALQINVVTFGKAAPNLVSTLNIGAFNIGNALGAWVGGSVIAHGFGLTRVPL 358
                A      + ++     AP   ++LNI   N+G  LGA VGG VI    GL  +  
Sbjct: 300 GVTQAAMFLVSHVRLMKAAPHAPAFAASLNIAGANLGIGLGAMVGGHVI-DTLGLGSLGF 358

Query: 359 AAAVLAILALLVTL 372
           AA+   ++++L+ L
Sbjct: 359 AASGFILVSILLAL 372