Pairwise Alignments

Query, 388 a.a., arabinose transporter permease from Pseudomonas simiae WCS417

Subject, 395 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

 Score =  324 bits (830), Expect = 3e-93
 Identities = 174/366 (47%), Positives = 240/366 (65%)

Query: 5   LLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMALATAK 64
           L  LA+ AF IGTTEF  MGLLP +A  + VSIP AG L+T YA+GV +GAP M L  ++
Sbjct: 12  LFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVGAPIMTLLFSR 71

Query: 65  LPRKAALVALMGIFIIGNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAANLVPANK 124
             ++AAL+ALM IF +GNLL +L+ DY  L+ +R+VT+L HGAFFG+G+VVAA++VP  K
Sbjct: 72  FGKRAALMALMAIFTLGNLLSSLSPDYYTLLASRLVTSLNHGAFFGLGAVVAASVVPKEK 131

Query: 125 RASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVVALIGLIRFLPAKRDE 184
           +ASAVA MF GLT+AN+ GVP  T +GQ+ GWR  F    V+G++A+  L   LP     
Sbjct: 132 QASAVATMFMGLTIANIGGVPAATWIGQQIGWRMAFAGTAVLGLLAMAALWYALPKGERG 191

Query: 185 EKLDMRAELAALKGAGIWLSLSMTALFAASMFTLFTYVAPLLGDVTGVSPKGVTWTLLLI 244
               +R ELA +    + L+++ T L A +MFTL+TYVAP+L ++TG S   VT  L+LI
Sbjct: 192 SVPHVRKELAVIARPSVLLAMATTVLGAGAMFTLYTYVAPVLAELTGASDGFVTLGLVLI 251

Query: 245 GLGLTVGNIIGGKLADKRLAATLIGVFISMAVVSTALTWTSVAVIPTEITLFLWATASFA 304
           G+G T+GN +GG+LAD  L          +A++  A+     + I   I L +W   +FA
Sbjct: 252 GVGFTLGNSLGGRLADWSLDGAAKIFLAVLALIMLAMPLVLGSHIGAAIALLVWGMFTFA 311

Query: 305 AVPALQINVVTFGKAAPNLVSTLNIGAFNIGNALGAWVGGSVIAHGFGLTRVPLAAAVLA 364
            VP LQ+ V+T    AP L S++N+GAFN+GNA+GA +GG+VI+   G   VP+A  VLA
Sbjct: 312 VVPPLQMRVMTAAIEAPGLASSINVGAFNLGNAVGAALGGAVISLNLGYAAVPMAGGVLA 371

Query: 365 ILALLV 370
              LL+
Sbjct: 372 AAGLLL 377