Pairwise Alignments

Query, 388 a.a., arabinose transporter permease from Pseudomonas simiae WCS417

Subject, 398 a.a., Arabinose efflux permease from Enterobacter asburiae PDN3

 Score =  187 bits (474), Expect = 6e-52
 Identities = 118/377 (31%), Positives = 205/377 (54%), Gaps = 5/377 (1%)

Query: 3   LSLLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAI-GAPFMALA 61
           L +++LA++AF   TTEFV +GLL D+A    +     G ++T YA  VA+   PFM L 
Sbjct: 13  LRVVMLAIAAFIFNTTEFVPVGLLSDIAESFQMETAQVGIMLTIYAWVVAMMSLPFMLL- 71

Query: 62  TAKLPRKAALVALMGIFIIGNLLCALASDYNVLMFARVVTALCHGAFFGIGSVVAANLVP 121
           T+++ R+  L+ L  +FI  ++L  +A ++ VL+ +R+  A  H  F+ I + +A  L P
Sbjct: 72  TSQMERRRLLIGLFVLFIASHVLSFMAWNFTVLVISRIGIAFAHAVFWSITASLAIRLAP 131

Query: 122 ANKRASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVVALIGLIRFLPAK 181
           A KRA A++L+ TG  LA VLG+P+G  +GQ  GWR+TF+A+ +  +V L+ LI+ LPA 
Sbjct: 132 AGKRAQALSLIATGTALAMVLGLPIGRIVGQYFGWRTTFFAIGMGALVTLVCLIKLLPAL 191

Query: 182 RDEEKLDMRAELAALKGAGIWLSLSMTALFAASMFTLFTYVAPLLGDVTGVSPKGVTWTL 241
             E    +++    ++   +     +T +   + +T ++Y+ P +  V G S    T  L
Sbjct: 192 PSEHSGSLKSLPLLIRRPALLGIYLLTVIVVTAHYTAYSYIEPFVQVVAGFSANFATVLL 251

Query: 242 LLIGLGLTVGNIIGGKLADKRLAATLIGVFISMAVVSTALTWTSV-AVIPTEITLFLWAT 300
           L++G    +G+++ G+L + R A+TL+   I + +    L   +  +     I    W  
Sbjct: 252 LILGGAGIIGSVLFGRLGN-RHASTLVSCAIGLLLACLLLLMPAAGSESHLAILSLFWGV 310

Query: 301 ASFAAVPALQINVVTFGKAAPNLVSTLNIGAFNIGNALGAWVGGSVIAHGFGLTRVPLAA 360
           A       +Q+ V+     A ++  +L  G FN+G   GA VG  VI H   ++ +    
Sbjct: 311 AIMIIGLGMQVKVLALAPDATDVAMSLFSGIFNLGIGAGALVGNQVILH-VSMSAIGYLG 369

Query: 361 AVLAILALLVTLITFRQ 377
           A+ A++AL+ +++ FR+
Sbjct: 370 AIPALVALVWSVLIFRK 386