Pairwise Alignments

Query, 384 a.a., antibiotic transporter from Pseudomonas simiae WCS417

Subject, 384 a.a., Probable efflux pump periplasmic linker TtgA from Pseudomonas putida KT2440

 Score =  572 bits (1475), Expect = e-168
 Identities = 292/384 (76%), Positives = 337/384 (87%)

Query: 1   MQLKPAVTALVTAVALASLLSGCKKEEAAPPAQIPQVGVVTIQPQAFTLTSELPGRTTAY 60
           MQ KPAVTALV+AVALA+LLSGCKKEEAAP AQ PQVGVVTIQPQAFTLTSELPGRT+AY
Sbjct: 1   MQFKPAVTALVSAVALATLLSGCKKEEAAPAAQAPQVGVVTIQPQAFTLTSELPGRTSAY 60

Query: 61  RIAEVRPQVNGIILKRLFKEGGDVKEGQQLYQIDPSVYEATLKSAQASLTQSKSISDRYK 120
           R+AEVRPQVNGIILKRLFKEG +VKEGQQLYQIDP+VYEATL +A+A+L  ++S+++RYK
Sbjct: 61  RVAEVRPQVNGIILKRLFKEGSEVKEGQQLYQIDPAVYEATLANAKANLLATRSLAERYK 120

Query: 121 QLVDEQAVSRQEYDTAVANRMTSEANVQTAQINVRYTKVFAPISGRIGRSSVTEGALVSN 180
           QL+DEQAVS+QEYD A A R+ +EA++++AQI++RYTKV APISGRIGRSS TEGALVSN
Sbjct: 121 QLIDEQAVSKQEYDDANAKRLQAEASLKSAQIDLRYTKVLAPISGRIGRSSFTEGALVSN 180

Query: 181 GQADAMAVIQQLDPIYVDVTQSSAEMLKLRRDLASGQLEKAGDNAAKVKLTLEDGSAYGV 240
           GQ DAMA IQQLDPIYVDVTQS+AE+LKLRRDL SGQL+KAGDNAA V+L LEDGS +  
Sbjct: 181 GQTDAMATIQQLDPIYVDVTQSTAELLKLRRDLESGQLQKAGDNAASVQLVLEDGSLFKQ 240

Query: 241 DGKLEFSEVSVDQTTGSVTLRAVFPNPDHTLLPGMFVHAQLQAGVNSKAILAPQQGVTRD 300
           +G+LEFSEV+VD+TTGSVTLRA+FPNPDHTLLPGMFVHA+L+AGVN+ AILAPQQGVTRD
Sbjct: 241 EGRLEFSEVAVDETTGSVTLRALFPNPDHTLLPGMFVHARLKAGVNANAILAPQQGVTRD 300

Query: 301 LKGTPTALVVNADNKVEQRELVANRTYGAYWLVEKGLNAGDRVITEGLQYVKPGAEVKVK 360
           LKG PTALVVN +NKVE R+L A+RT G+ WL+E+GLN GDR+ITEGLQYV+PG EVKV 
Sbjct: 301 LKGAPTALVVNQENKVELRQLKASRTLGSDWLIEEGLNPGDRLITEGLQYVRPGVEVKVS 360

Query: 361 AADNAKPADAGSAAAPAAAAGKGE 384
            A N K       A  A A  K E
Sbjct: 361 DATNVKKPAGPDQANAAKADAKAE 384