Pairwise Alignments

Query, 384 a.a., antibiotic transporter from Pseudomonas simiae WCS417

Subject, 385 a.a., multidrug efflux RND transporter periplasmic adaptor subunit AcrE from Escherichia coli ECRC62

 Score =  342 bits (878), Expect = 8e-99
 Identities = 188/373 (50%), Positives = 257/373 (68%), Gaps = 23/373 (6%)

Query: 17  ASLLSGC--KKEEAAPPAQIPQVGVVTIQPQAFTLTSELPGRTTAYRIAEVRPQVNGIIL 74
           A+L++GC  K EE A   + PQV V  ++     + +ELPGRT AYRIAEVRPQV+GI+L
Sbjct: 18  AALIAGCNDKGEEKAHVGE-PQVTVHIVKTAPLEVKTELPGRTNAYRIAEVRPQVSGIVL 76

Query: 75  KRLFKEGGDVKEGQQLYQIDPSVYEATLKSAQASLTQSKSIS-------DRYKQLVDEQA 127
            R F EG DV+ GQ LYQIDP+ Y+A   SA+  L +S++ +        RY  LV  + 
Sbjct: 77  NRNFTEGSDVQAGQSLYQIDPATYQANYDSAKGELAKSEAAAAIAHLTVKRYVPLVGTKY 136

Query: 128 VSRQEYDTAVANR-------MTSEANVQTAQINVRYTKVFAPISGRIGRSSVTEGALVSN 180
           +S+QEYD A+A+        + ++A V++A+IN+ YTKV APISGRIG+S+VTEGALV+N
Sbjct: 137 ISQQEYDQAIADARQADAAVIAAKATVESARINLAYTKVTAPISGRIGKSTVTEGALVTN 196

Query: 181 GQADAMAVIQQLDPIYVDVTQSSAEMLKLRRDLASGQLEKAGDNA-AKVKLTLEDGSAYG 239
           GQ   +A +QQLDPIYVDVTQSS + ++L++ +  G L K  +NA + V+L +E+G  Y 
Sbjct: 197 GQTTELATVQQLDPIYVDVTQSSNDFMRLKQSVEQGNLHK--ENATSNVELVMENGQTYP 254

Query: 240 VDGKLEFSEVSVDQTTGSVTLRAVFPNPDHTLLPGMFVHAQLQAGVNSKAILAPQQGVTR 299
           + G L+FS+V+VD++TGS+TLRAVFPNP HTLLPGMFV A++  GV   AIL PQQGV+R
Sbjct: 255 LKGTLQFSDVTVDESTGSITLRAVFPNPQHTLLPGMFVRARIDEGVQPDAILIPQQGVSR 314

Query: 300 DLKGTPTALVVNADNKVEQRELVANRTYGAYWLVEKGLNAGDRVITEGLQYVKPGAEVKV 359
             +G  T L+VN  ++VE R +VA++  G  WL+ +GL +GD+VI  GLQ  +PG +VK 
Sbjct: 315 TPRGDATVLIVNDKSQVEARPVVASQAIGDKWLISEGLKSGDQVIVSGLQKARPGEQVK- 373

Query: 360 KAADNAKPADAGS 372
             A    PAD  S
Sbjct: 374 --ATTDTPADTAS 384