Pairwise Alignments

Query, 169 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 170 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  148 bits (373), Expect = 5e-41
 Identities = 68/150 (45%), Positives = 107/150 (71%)

Query: 14  LYRDHHGWLQGWLRRRLGDREHAADVAQDTFLRLLVSGRFPGDKESRSYLAQIARNLVID 73
           LY  HH WL GWLRRRLG    AAD+AQDT++RLL +   P   E R++LA +A+ ++ +
Sbjct: 18  LYHAHHNWLTGWLRRRLGCPHSAADLAQDTYMRLLQAREAPQLVEPRAFLATVAKRVLCN 77

Query: 74  QWRRLRIERAYLESIAHLPEPESPSLETRALILETLMQIDAMLDRMPDNVRQAFLLSQFE 133
            +RR  +ERAYL+++A +PE  +P  E +A+I ETL+ +D +LD +P  V++AFLL+Q +
Sbjct: 78  HFRRQELERAYLQALAQVPEEVAPCEEQKAIIFETLLALDHLLDGLPPLVKRAFLLAQVD 137

Query: 134 GLSYAQIAERLGVTVSSVQKYMTRAIVACY 163
           GL   +IA  LG+++++V++Y+ +A + CY
Sbjct: 138 GLGQGEIARELGISLATVKRYLNKAAMRCY 167