Pairwise Alignments

Query, 169 a.a., RNA polymerase sigma factor from Pseudomonas simiae WCS417

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  170 bits (430), Expect = 1e-47
 Identities = 82/160 (51%), Positives = 120/160 (75%)

Query: 10  QLHLLYRDHHGWLQGWLRRRLGDREHAADVAQDTFLRLLVSGRFPGDKESRSYLAQIARN 69
           ++ LLY+ HH WL+GWLR R+G  EHAAD+AQDTF+RLL + +    KE R+YL+ IAR 
Sbjct: 11  EVALLYQSHHTWLRGWLRSRVGCSEHAADLAQDTFVRLLRARQMSPLKEPRAYLSSIARG 70

Query: 70  LVIDQWRRLRIERAYLESIAHLPEPESPSLETRALILETLMQIDAMLDRMPDNVRQAFLL 129
           L+IDQ+RR  +ERAY E +AHLPE E PS E + +IL++L ++D  L ++   VRQAFLL
Sbjct: 71  LMIDQFRRRALERAYQEGLAHLPEAEVPSEEDKLVILDSLERLDRALQQLKPRVRQAFLL 130

Query: 130 SQFEGLSYAQIAERLGVTVSSVQKYMTRAIVACYQVAYEE 169
           +Q +GLS  Q+A+RLGV+ ++V++ + +A+ ACY++ Y +
Sbjct: 131 AQLDGLSIVQVAQRLGVSRATVERDLAKALGACYRLRYAD 170