Pairwise Alignments

Query, 416 a.a., porin from Pseudomonas simiae WCS417

Subject, 427 a.a., porin from Pseudomonas simiae WCS417

 Score =  269 bits (688), Expect = 1e-76
 Identities = 154/422 (36%), Positives = 235/422 (55%), Gaps = 19/422 (4%)

Query: 9   LLLATAVASLALPVVAEEHGFLEDASANLNLRNFFFNRNYTNPTKAQGGAQEWTQSFILD 68
           +L    + S  L     +  F++D+ A+L+L+N++FNR+Y      Q   +EW Q FIL+
Sbjct: 9   ILKGVGLMSGGLLCAPAQADFIKDSKADLDLKNYYFNRDYREDA-GQSKREEWAQGFILN 67

Query: 69  AKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGTQLLPLDHDGRPA---------DEFGRL 119
            KSGFT+GTVGFGVDV+G+  LKLD      G+ LL  D+D  P          DE+ + 
Sbjct: 68  LKSGFTEGTVGFGVDVVGMLGLKLDSSPDRSGSGLLSRDNDATPGKPSYSKRAHDEYSKY 127

Query: 120 GVAFKARISKTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRAN 179
           GV  K R +++E++ G  +P LP L+ +  R  PQT RG Q+TS +I GL L GGQ    
Sbjct: 128 GVTGKVRFAQSELRSGYLLPDLPTLQPNTSRLFPQTFRGTQVTSTDIAGLALIGGQIDQT 187

Query: 180 SPRDDSSMNDLSMFG-----KTAFTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQF 234
             R+ +   D+ +       K+   SDRF F G +Y      T +    AQL+DIY Q F
Sbjct: 188 KQRESTEYEDMGLTSQSGAYKSTAKSDRFRFAGGDYKLTPGMT-LSYHFAQLEDIYQQHF 246

Query: 235 INLIHSQPLGNWTLGANLGFFYGKDDGSARAGELDNKTWSGLFSAKYGGNTFYLGLQKLT 294
           + L +S  LG  TL  ++ +F     G+  AG++DN+  S      Y G++   G Q+  
Sbjct: 247 VGLKNSFALGGGTLKTDIRYFDADKSGAGLAGKVDNRALSTRAMFSYKGHSLGGGYQEQY 306

Query: 295 GNSAWMRVNGTSGGTLANDSYNASYDNAQEKSWQVRHDYNFAALGVPGLTLMNRYISGSN 354
           G++ +  V+GT+   L ++   +++    E+ W  R+D++FAALGVPGLT   R+  G  
Sbjct: 307 GDTPFTYVDGTN-TYLFSEYQLSNFSQTNERVWHARYDFDFAALGVPGLTFSTRWAKGDQ 365

Query: 355 VHT-GTVTDGKEWGRESELGYTVQSGSLKNLTVRLRNSSMRRDYSNNEFDENRLIVSYPI 413
               G   +G+EW R+ +LGY  QSG+LK +++R RN   + +Y   + +ENR+IV Y +
Sbjct: 366 AQVKGFAGEGREWERDIDLGYVFQSGTLKGVSLRWRNGLSKANYL-RDMNENRVIVGYTV 424

Query: 414 SL 415
           +L
Sbjct: 425 AL 426