Pairwise Alignments

Query, 416 a.a., porin from Pseudomonas simiae WCS417

Subject, 430 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  370 bits (951), Expect = e-107
 Identities = 200/418 (47%), Positives = 264/418 (63%), Gaps = 12/418 (2%)

Query: 8   RLLLATAVASLALPVVAEEHGFLEDASANLNLRNFFFNRNYTNPTKA--QGGAQEWTQSF 65
           RL      A+L     AEE GF+E A A L  RN+FF+R+Y +   A  Q   QEW Q F
Sbjct: 14  RLAGGCIAAALCAEATAEEAGFIEGARATLQARNYFFSRDYADIKGASTQSRTQEWAQGF 73

Query: 66  ILDAKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGTQLLPLDHDGRPADEFGRLGVAFKA 125
           IL+A SG+TQGT+G GVDV GL   KLD       + LLP    G+ ADE+ RLG A K 
Sbjct: 74  ILNASSGYTQGTLGVGVDVTGLLGFKLDSSPEHARSGLLPSLDSGKSADEYSRLGAAIKF 133

Query: 126 RISKTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRANSPRDDS 185
           ++S+TE+KVGE MP LP+L   D R LP T +G  + S+E  GLTL  GQFR+ S RD S
Sbjct: 134 KVSQTELKVGELMPNLPVLLFSDLRLLPPTYQGAMLESREFAGLTLSAGQFRSTSLRDSS 193

Query: 186 S-------MNDLSMFGKTA-FTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINL 237
           +       +ND     + A FTSDRFN+ GA+YAFND RT +G+W AQL+DIY Q+F + 
Sbjct: 194 NSQKMYALVNDPINPARLARFTSDRFNYVGADYAFNDNRTSVGVWQAQLEDIYQQRFYSF 253

Query: 238 IHSQPLGNWTLGANLGFFYGKDDGSARAGELDNKTWSGLFSAKYGGNTFYLGLQKLTGNS 297
            H++PLG+WTLG N G+F  ++DGS  AG+ DN     LFSAK GG+TFY+G Q++ G+ 
Sbjct: 254 KHAEPLGSWTLGVNAGYFDAREDGSKVAGDYDNHALFSLFSAKTGGHTFYVGYQQIGGDD 313

Query: 298 AWMRVNGTSGGTLANDSYNASYDNAQEKSWQVRHDYNFAALGVPGLTLMNRYISGSNVHT 357
            +++V G +   + N      +    E+SWQVRHDYNF ALG+PGLT   RY+ G +V T
Sbjct: 314 GFIQV-GANTNPMGNTLPTYEFSAPGERSWQVRHDYNFVALGLPGLTSTLRYVKGRDVET 372

Query: 358 GTVTDGKEWGRESELGYTVQSGSLKNLTVRLRNSSMRRDYSNNEFDENRLIVSYPISL 415
           G   +G++  R+ +L Y VQSG L  L +R+RN   R +Y   + DENRLI+SY I +
Sbjct: 373 GLGFEGRDRERDLDLAYVVQSGPLAGLGIRVRNVMARSNY-RTDIDENRLILSYTIKV 429