Pairwise Alignments

Query, 416 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  460 bits (1183), Expect = e-134
 Identities = 221/409 (54%), Positives = 295/409 (72%), Gaps = 2/409 (0%)

Query: 8   RLLLATAVA-SLALPVVAEEHGFLEDASANLNLRNFFFNRNYTNPTKAQGGAQEWTQSFI 66
           R +LA ++A  L LP  A+E GFLEDA   L LRN++FNR++ +P  A+G  +EW Q FI
Sbjct: 10  RSVLAVSLAFGLGLPAWAQEGGFLEDAKGGLTLRNYYFNRDFRDPGAAKGKVEEWAQGFI 69

Query: 67  LDAKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGTQLLPLDHDGRPADEFGRLGVAFKAR 126
               SG+T G +GFG+D + L+ +KLD G GT G++LLP+  DGR AD++GR G+A K R
Sbjct: 70  FKFSSGYTPGLIGFGLDGIALFGVKLDSGGGTSGSELLPVHDDGRAADDYGRAGLAAKLR 129

Query: 127 ISKTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRANSPRDDSS 186
           +S TE+KVGE +P +P+LR DDGR LPQT RG  + S+EI+GL+L  GQ+R  S R  S 
Sbjct: 130 MSATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSD 189

Query: 187 MNDLSMFGKTAFTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIHSQPLGNW 246
           M DLS +     TSD FN+ GAEY FN +RT IG W++QL+DIY Q + NL+HSQ +G W
Sbjct: 190 MQDLSAWAAPGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLLHSQRVGEW 249

Query: 247 TLGANLGFFYGKDDGSARAGELDNKTWSGLFSAKYGGNTFYLGLQKLTGNSAWMRVNGTS 306
           TLGANLG+F  +DDG AR G++ ++T   L SA + G+T YLGLQK++G+S WM V G+S
Sbjct: 250 TLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSVYGSS 309

Query: 307 GGTLANDSYNASYDNAQEKSWQVRHDYNFAALGVPGLTLMNRYISGSNVHTGTVTDGKEW 366
           G TL ND +N ++ NA E+SWQVR+DYNFAALGVPGL  M RY  G N  T   ++GKEW
Sbjct: 310 GRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGHGENATTAAGSNGKEW 369

Query: 367 GRESELGYTVQSGSLKNLTVRLRNSSMRRDYSNNEFDENRLIVSYPISL 415
            R++E+ YT QSG+LKNL +RL N++ RR + N++ D+ RLIVSYP++L
Sbjct: 370 ERDAEVNYTFQSGALKNLNIRLNNATNRRSF-NSDLDQTRLIVSYPLTL 417