Pairwise Alignments

Query, 416 a.a., porin from Pseudomonas simiae WCS417

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  228 bits (580), Expect = 4e-64
 Identities = 149/450 (33%), Positives = 234/450 (52%), Gaps = 37/450 (8%)

Query: 1   MSTFHPRRLLLATAVASLALPVVAEEH---GFLEDASANLNLRNFFFNRNYT-------N 50
           M+   P  L    A+A +   VVA E    GF+E ++ ++  RNF+FNR+         N
Sbjct: 1   MTCRSPLTLAACLALAGVGSQVVAAEKSADGFMEGSTLSVLNRNFYFNRDNRDSVAPTHN 60

Query: 51  PTKA--QGGAQEWTQSFILDAKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGTQ----LL 104
           P+K    G ++ W  + I   +SGFTQGTVG G+D   +  LKLD G G  G +    +L
Sbjct: 61  PSKQADNGYSEAWGHAVITRFESGFTQGTVGVGLDAFAMLGLKLDTGGGRNGGRSSFDVL 120

Query: 105 PLDHDGRPADEFGRLGVAFKARISKTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSK 164
           P+D DG+  DE+ ++G A K R+  T +KVG+  P  P++ + D R LP++ RG  + + 
Sbjct: 121 PVDRDGQARDEYTKVGGAAKLRLFDTVLKVGDVFPANPVVAAGDSRLLPESFRGVTLENS 180

Query: 165 EIDGLTLYGGQFRANSPRDDSSM--NDLSMFGKTAFTSDRFNFQGAEYAFNDKRTQIGLW 222
            I  LTL  G+  A S    S +  N ++ +G     S    + G +Y  N+    + L+
Sbjct: 181 SIKDLTLQAGRLHAMSQPMSSDLRENFVTFYGGPV-DSPWIAYGGGDYRLNE-HVSVSLF 238

Query: 223 NAQLKDIYSQQFINLIHSQPLGNWTLGANLGFFYGK--DDGSARAGELDNKTWSGLFSAK 280
           +++LKD ++Q +     S PL    L    GF Y K  D+G  R G  DN  WS     +
Sbjct: 239 SSRLKDAWNQYYAGTSLSWPLSE-ALALIGGFNYYKAVDEGQQRLGAFDNDIWSAKLGVR 297

Query: 281 YGGNTFYLGLQKLTGNSAWMRVNGTSGGTLANDSYNASYDNAQEKSWQVRHDYNFAALGV 340
           +G +T  L  Q+  G+  +  +  +    L N    + ++  +E+SW +R+D N AA GV
Sbjct: 298 FGAHTLALTHQRNNGDDDFDYLRQSDSIFLDNSIQYSDFNAPKERSWMLRYDLNMAAYGV 357

Query: 341 PGLTLMNRYISGS--------------NVHTGTVTDGKEWGRESELGYTVQSGSLKNLTV 386
           PGL+ M RY  G+              +V    +TD K W R+ E+ Y VQ+G+ K+L++
Sbjct: 358 PGLSFMTRYGKGNDADYSNANATYMRRDVAGNPLTDQKRWERDIEVKYVVQTGAAKDLSL 417

Query: 387 RLRNSSMRRDYSNNEFDENRLIVSYPISLL 416
           R+R ++ R     ++ DE R+IV YP+S+L
Sbjct: 418 RVRQATTRATAFESDLDEVRMIVEYPLSIL 447