Pairwise Alignments

Query, 416 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

 Score =  285 bits (730), Expect = 1e-81
 Identities = 158/417 (37%), Positives = 250/417 (59%), Gaps = 9/417 (2%)

Query: 2   STFHPRRLLLATAVASLALPVVAEEHGFLEDASANLNLRNFFFNRNYTNPTKAQGGAQEW 61
           +T +    L A  +A++ALP+ A    F+ D+ A L LRN + NR++      Q  A+EW
Sbjct: 6   TTMNRTHFLSAAWLATVALPMPALAD-FIGDSHARLELRNHYINRDFRQSNAPQAKAEEW 64

Query: 62  TQSFILDAKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGTQLLPLDHDGR-PADEFGRLG 120
            Q F    +SGFT+G VGFGVD LG   +KLD  R    T LLP   +   P D++  LG
Sbjct: 65  GQGFTAKLESGFTEGPVGFGVDALGQLGIKLDSSRDRRNTGLLPFGPNSHEPVDDYSELG 124

Query: 121 VAFKARISKTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRANS 180
           +  K R+SK+ +++G   P+LP++  +D R L  + +GG +TS+++DGLT   G+    +
Sbjct: 125 LTGKVRVSKSTLRLGTLQPILPVVVYNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKAN 184

Query: 181 PRDDSSMNDLSMFGKTAFTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIHS 240
            RD S  +D+   G  A +SD  +F G  YA   + T +  + A+L+DIY QQF+ LI +
Sbjct: 185 LRDSSGRDDI---GYGAASSDHLDFGGGSYAITPQTT-VSYYYAKLQDIYRQQFVGLIDT 240

Query: 241 QPLGNW-TLGANLGFFYGKDDGSARAGELDNKTWSGLFSAKYGGNTFYLGLQKLTGNSAW 299
           +PL    +L ++L +F  ++DG+ RAG +DN+ ++ +F+     + F    Q+++G+SA+
Sbjct: 241 RPLAEGVSLRSDLRYFDSRNDGAERAGNIDNRNFNAMFTLGVRAHKFTATWQQMSGDSAF 300

Query: 300 MRVNGTSGGTLANDSYNASYDNAQEKSWQVRHDYNFAALGVPGLTLMNRYISGSNVHTGT 359
             VNG    T+   +YN ++  A   SWQVR+DY+F A+G+PGL+ M RY  G +  T T
Sbjct: 301 PFVNGGDPFTVNLVTYN-TFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTDGRHAETAT 359

Query: 360 VTDGKEWGRESELGYTVQSGSLKNLTVRLRNSSMRRDYS-NNEFDENRLIVSYPISL 415
           VT+G+E  R++++ Y +QSG  K++++R RN + R      N  DENRLI+ Y ++L
Sbjct: 360 VTNGRERERDTDITYVIQSGPFKDVSLRWRNVTFRSGNGLTNAVDENRLIIGYTLAL 416