Pairwise Alignments

Query, 416 a.a., porin from Pseudomonas simiae WCS417

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  349 bits (895), Expect = e-100
 Identities = 184/409 (44%), Positives = 262/409 (64%), Gaps = 12/409 (2%)

Query: 11  LATAVASLALPVVAEEHGFLEDASANLNLRNFFFNRNYTNPTKA--QGGAQEWTQSFILD 68
           +A  +  L+ P++A E GF ED+ A L+ RN++F+R++++   A  Q  A+EW Q FILD
Sbjct: 7   VALGLTLLSQPLLAAEGGFFEDSKATLSARNYYFSRDFSDIVGANKQSKAEEWAQGFILD 66

Query: 69  AKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGTQLLPLDHDGRPADEFGRLGVAFKARIS 128
            KSG+T G VGFGVD LGL  +KLD       T LLP+  DGR ADE+ RL   FKAR+S
Sbjct: 67  FKSGYTPGPVGFGVDALGLLGIKLDSSPDRTNTGLLPVHGDGRAADEYSRLAPTFKARLS 126

Query: 129 KTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRANSPRD---DS 185
           KTE++ GE  P LP+L   D R LP T +G  ++S EIDGLT+  G  ++   R+   D 
Sbjct: 127 KTELRAGELQPNLPVLTFSDIRLLPPTYQGVSLSSSEIDGLTMQAGHLKSTHLRNEGGDG 186

Query: 186 SMNDLSMFGKTAF---TSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIHSQP 242
            MN  +M G        SD FN+ G +YAFN  ++ + LW  QL+DIY Q F+ L HS+P
Sbjct: 187 KMN--AMLGHVPMRQAESDAFNYVGGDYAFNANQSSVSLWYGQLEDIYQQGFVGLKHSKP 244

Query: 243 LGNWTLGANLGFFYGKDDGSARAGELDNKTWSGLFSAKYGGNTFYLGLQKLTGNSAWMRV 302
           +G+W L ANLG+F  ++ G A  G +DN+ +  LF+A++GG++F+ G Q + G+S + RV
Sbjct: 245 VGDWVLSANLGYFTAREQGDALLGNIDNQAFFSLFTARHGGHSFHAGYQGIYGDSPFPRV 304

Query: 303 NGTSGGTLANDSYNASYDNAQEKSWQVRHDYNFAALGVPGLTLMNRYISGSNVHTGTVTD 362
                  L N+     +    E+S+QVR+DYNFAA+GVPGLT   RYI+G+NV TG   +
Sbjct: 305 FANI-SPLGNEVPTYEFAYTDERSYQVRYDYNFAAMGVPGLTATVRYITGNNVDTGLGYE 363

Query: 363 GKEWGRESELGYTVQSGSLKNLTVRLRNSSMRRDYSNNEFDENRLIVSY 411
           G++  R+ ++GY VQSG+LK L +R+RN+  R +Y  ++ DENRL + Y
Sbjct: 364 GRDRERDLDIGYAVQSGALKGLGIRVRNAMARSNY-RSDIDENRLTLVY 411