Pairwise Alignments

Query, 416 a.a., porin from Pseudomonas simiae WCS417

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  295 bits (754), Expect = 2e-84
 Identities = 165/402 (41%), Positives = 229/402 (56%), Gaps = 14/402 (3%)

Query: 23  VAEEHGFLEDASANLNLRNFFFNRNYTNP--------TKAQGGAQEWTQSFILDAKSGFT 74
           VA   GF+ED+   L LRN +FN N+ +           A+    EW Q F+LD +SGFT
Sbjct: 20  VAGAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFLLDYQSGFT 79

Query: 75  QGTVGFGVDVLGLYSLKLDGGRGTGGTQLLPLDHDGRPADEFGRLGVAFKARISKTEVKV 134
           QGT+G GVD +GL  ++LD GRG  GT LLP+  DGR ADEF   G+  KAR+  T VK 
Sbjct: 80  QGTLGLGVDAMGLLGVRLDSGRGRSGTGLLPVHDDGRAADEFASAGITAKARLGSTVVKH 139

Query: 135 GEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRANSPRDDSSMNDLSMFG 194
           G  +P  P+L  +D R LPQT +G Q+TS +ID LTL  G       RD S    L + G
Sbjct: 140 GTLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQRDSSDSTGLYLDG 199

Query: 195 KTAFTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIHSQPLGNWTLGANLGF 254
                S  F+F GA+YA + K+ ++  ++ +L+  Y Q F  L+H  PLG   L  +L +
Sbjct: 200 YGGPASGDFSFAGADYAVS-KQLRLSYFHGELEHFYRQDFAGLVHDLPLGGGVLTTDLRY 258

Query: 255 FYGKDDGSARAGELDNKTWSGLFSAKYGGNTFYLGLQKLTGNSAWMRVNGTSGGTLANDS 314
           F  +D G+A  G +DN  +SG  S  + G+T   G Q L G +    ++G +  + +N  
Sbjct: 259 FKSRDSGTAYGGGIDNDMFSGQLSYAHSGHTVGAGYQVLDGEAGLPYISGATVYSFSNVG 318

Query: 315 YNASYDNAQEKSWQVRHDYNFAALGVPGLTLMNRYISGSNVHTGTVTDG-KEWGRESELG 373
               +   +EK+W   + YNFAA GVPGLT M RY+SG N  +G   +G KEW R++E+ 
Sbjct: 319 I-GKFIEEEEKTWMASYAYNFAAAGVPGLTFMTRYLSGDNGRSG--GEGIKEWERDAEIA 375

Query: 374 YTVQSGSLKNLTVRLRNSSMRRDYSNNEFDENRLIVSYPISL 415
           Y VQ G LK L V+LRN   R D++    D NRL ++Y I++
Sbjct: 376 YVVQGGPLKGLGVKLRNYVYRSDFARGR-DSNRLYLTYDIAI 416