Pairwise Alignments

Query, 416 a.a., porin from Pseudomonas simiae WCS417

Subject, 412 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  600 bits (1547), Expect = e-176
 Identities = 290/411 (70%), Positives = 344/411 (83%), Gaps = 6/411 (1%)

Query: 6   PRRLLLATAVASLALPVVAEEHGFLEDASANLNLRNFFFNRNYTNPTKAQGGAQEWTQSF 65
           P  LL A  +A L  P  +   GF+ED  A L LRNF+ NRN+TNP+  Q  A+EWTQSF
Sbjct: 8   PFALLGAGVIAGL--PGTSLAAGFVEDGKATLGLRNFYINRNFTNPSNPQSKAEEWTQSF 65

Query: 66  ILDAKSGFTQGTVGFGVDVLGLYSLKLDGGRGTGGTQLLPLDHDGRPADEFGRLGVAFKA 125
           ILDA+SGFT+G +GFGVDVLGL+S+KLDGG GT GT LLP   DGRPAD++GRL VA KA
Sbjct: 66  ILDARSGFTEGPIGFGVDVLGLWSVKLDGGGGTYGTALLPRHDDGRPADDYGRLAVAGKA 125

Query: 126 RISKTEVKVGEWMPVLPILRSDDGRSLPQTLRGGQITSKEIDGLTLYGGQFRANSPRDDS 185
           RISKTE+K+GEWMPVLPILRSDDGRSLPQT RGGQ+TS EI GLTLYGGQFR NSPR+D+
Sbjct: 126 RISKTELKIGEWMPVLPILRSDDGRSLPQTFRGGQVTSNEIAGLTLYGGQFRGNSPRNDA 185

Query: 186 SMNDLSMFGKTAFTSDRFNFQGAEYAFNDKRTQIGLWNAQLKDIYSQQFINLIHSQPLGN 245
           SM D+S  G     SDRFNF G EY FN  RTQ+GLWNA LKD+Y QQ++ L HSQP+G+
Sbjct: 186 SMEDMSYGGG---VSDRFNFVGGEYKFNQDRTQVGLWNAVLKDVYQQQYLQLSHSQPVGD 242

Query: 246 WTLGANLGFFYGKDDGSARAGELDNKTWSGLFSAKYGGNTFYLGLQKLTGNSAWMRVNGT 305
           WTLGANLG+F+G +DGS RAG+LDNKT+SG+FSAKYGG+TF++GLQK+ G++ WMRVNGT
Sbjct: 243 WTLGANLGYFHGDEDGSERAGQLDNKTYSGMFSAKYGGSTFWVGLQKVDGDT-WMRVNGT 301

Query: 306 SGGTLANDSYNASYDNAQEKSWQVRHDYNFAALGVPGLTLMNRYISGSNVHTGTVTDGKE 365
           SGGTLANDSYN+S+DNA E+SWQVRHD+NF  +GVPGLTLMNRYISG +VH+G VTDGKE
Sbjct: 302 SGGTLANDSYNSSFDNANERSWQVRHDFNFVTVGVPGLTLMNRYISGRDVHSGGVTDGKE 361

Query: 366 WGRESELGYTVQSGSLKNLTVRLRNSSMRRDYSNNEFDENRLIVSYPISLL 416
           W RE+EL Y +QSG+ K+L+V+ RNSS+RRDYSNNEFDENRLI +YP+SLL
Sbjct: 362 WVRETELAYVIQSGAFKDLSVKWRNSSIRRDYSNNEFDENRLIFNYPLSLL 412