Pairwise Alignments
Query, 500 a.a., hemolysin from Pseudomonas simiae WCS417
Subject, 3608 a.a., putative secreted hemolysin-type calcium-binding bacteriocin from Pseudomonas putida KT2440
Score = 92.8 bits (229), Expect = 2e-22
Identities = 63/168 (37%), Positives = 79/168 (47%), Gaps = 26/168 (15%)
Query: 121 DGKALTFHLKTHGGNDNIRIDANVTQPVIVEAGDGNDRVQAGAGYTRLFGGKGDDVLRLG 180
DG A L GGND ++ GND + AG +LFGG GDD LR
Sbjct: 3385 DGGAGNDTLSGDGGND------------VLNGNAGNDTLNGDAGNDQLFGGLGDDQLR-- 3430
Query: 181 SGLGYAEGNDGDDTLIGGTGDNVMYGNNGNDRLYAGAGAKSKTSYLDGGNGKDLLYAGNG 240
G GDD+L G G++ + G GND L GAG S LDGGNG D L G+G
Sbjct: 3431 -------GGGGDDSLDAGGGNDTLLGEAGNDNLNGGAGDDS----LDGGNGNDTLQGGDG 3479
Query: 241 HTVLHGGPGDDRLIGHDRSTFYTG-SGCDKVIANRPGDRIYAQAGDTI 287
+ L G G D LIG + F G +G D V+ D + A G+ +
Sbjct: 3480 NDTLFGDVGTDTLIGGAGNDFLNGAAGNDTVVGGAGNDTMIATDGNDV 3527
Score = 79.0 bits (193), Expect = 3e-18
Identities = 64/216 (29%), Positives = 93/216 (43%), Gaps = 22/216 (10%)
Query: 153 GDGN---DRVQAGAGYTRLFGGKGDDVLRLGSGLGYAEGNDGDDTLIGGTGDNVMYGNNG 209
G GN + + GAG L G G+DVL +G G+ G+D L GG GD+ + G G
Sbjct: 3375 GTGNGLANIIDGGAGNDTLSGDGGNDVLNGNAGNDTLNGDAGNDQLFGGLGDDQLRGGGG 3434
Query: 210 NDRLYAGAG-----AKSKTSYLDGGNGKDLLYAGNGHTVLHGGPGDDRLIGH-DRSTFYT 263
+D L AG G ++ L+GG G D L GNG+ L GG G+D L G T
Sbjct: 3435 DDSLDAGGGNDTLLGEAGNDNLNGGAGDDSLDGGNGNDTLQGGDGNDTLFGDVGTDTLIG 3494
Query: 264 GSGCDKVIANRPGDRIYAQAGDTIKRLNGSVLTTVTTDQSSLVGFRIKGSADFIQRVEDD 323
G+G D + D + AG+ T + TD + + F D I +
Sbjct: 3495 GAGNDFLNGAAGNDTVVGGAGND---------TMIATDGNDVFQFAAGFGNDLIINFD-- 3543
Query: 324 LALLRSSPQGKQMLAEMNAIALRNGAPVMLMEDRVD 359
+ + Q + + +N A GA V + + D
Sbjct: 3544 --AIAAGGQDRLDITALNITAATFGASVTIADVGAD 3577
Score = 74.7 bits (182), Expect = 5e-17
Identities = 64/206 (31%), Positives = 93/206 (45%), Gaps = 30/206 (14%)
Query: 129 LKTHGGNDNIRIDANVTQPV------IVEAGDGNDRVQAGAGYTRLFGGKGDDVLRLGSG 182
L + GND + DA Q + G G+D + AG G L G G+D L G+G
Sbjct: 3402 LNGNAGNDTLNGDAGNDQLFGGLGDDQLRGGGGDDSLDAGGGNDTLLGEAGNDNLNGGAG 3461
Query: 183 LGYAEGNDGDDTLIGGTGDNVMYGNNGNDRLYAGAGAKSKTSYLDGGNGKDLLYAGNGHT 242
+G +G+DTL GG G++ ++G+ G D L GAG +L+G G D +
Sbjct: 3462 DDSLDGGNGNDTLQGGDGNDTLFGDVGTDTLIGGAG----NDFLNGAAGNDTVV------ 3511
Query: 243 VLHGGPGDDRLI---GHDRSTFYTGSGCDKV-----IANRPGDRIYAQAGDTIKRLNGSV 294
GG G+D +I G+D F G G D + IA DR+ A + G+
Sbjct: 3512 ---GGAGNDTMIATDGNDVFQFAAGFGNDLIINFDAIAAGGQDRLDITALNITAATFGAS 3568
Query: 295 LTTVTTDQSSLVGFRIKGSADFIQRV 320
+T +LV G+AD I+ V
Sbjct: 3569 VTIADVGADTLVSI---GAADSIRLV 3591
Score = 71.6 bits (174), Expect = 4e-16
Identities = 67/231 (29%), Positives = 98/231 (42%), Gaps = 25/231 (10%)
Query: 80 NNSLILETGDKADQVHISQTY--SGQLDVRVNGQLYRFDSQDKDGKA-LTFHLKTHG--- 133
NNS +D H+S T + + VN Q +F DGKA T ++ +G
Sbjct: 821 NNSFAKLIMANSDVTHLSNTVFLTPTFTLEVN-QANQFTGLGADGKADPTGGIEINGVEI 879
Query: 134 -------GNDNIRIDANVTQ-----PVIVEAGDGNDRVQAGAGYTRLFGGKGDDVLRLGS 181
D + D+N V++ GND + + G L+G GDD+L G+
Sbjct: 880 VPLVIRDNPDTVGPDSNFLHYTGEDHVVLGGTAGNDIIISSEGDDTLYGDAGDDLLEGGA 939
Query: 182 GLGYAEGNDGDDTLIGGTGDNVMYGNNGNDRLYAGAGAKSKTSYLDGGNGKDLLYAGNGH 241
G G GDD + GDN + GN GND + AG+ + L GG+G+D +
Sbjct: 940 GNDAVLGGAGDDIITDSFGDNRLEGNAGNDVIVAGSMGVAGNLIL-GGDGQDFIITTEDI 998
Query: 242 TVLHGGPGDDRLIGHDRSTFYTGSGCDKVIA-----NRPGDRIYAQAGDTI 287
+ GG GDD ++G + TG+ D I PGD GD +
Sbjct: 999 STTFGGLGDDFILGAKTNLPPTGNEGDDWIEKGTQDGAPGDNFAPLLGDEV 1049
Score = 71.6 bits (174), Expect = 4e-16
Identities = 60/179 (33%), Positives = 82/179 (45%), Gaps = 29/179 (16%)
Query: 150 VEAGDGNDRVQAGAGYTRLFGGKGDDVLRLGSGLGYAEGNDGDDTLIGGTGDNVMYGNNG 209
++AG GND + AG L GG GDD L G+G +G DG+DTL G G + + G G
Sbjct: 3438 LDAGGGNDTLLGEAGNDNLNGGAGDDSLDGGNGNDTLQGGDGNDTLFGDVGTDTLIGGAG 3497
Query: 210 NDRLYAGAGAKSKTSYLDGGNGKDLLYAGNGHTVLH--GGPGDDRLI--------GHDR- 258
ND L AG + GG G D + A +G+ V G G+D +I G DR
Sbjct: 3498 NDFLNGAAG----NDTVVGGAGNDTMIATDGNDVFQFAAGFGNDLIINFDAIAAGGQDRL 3553
Query: 259 ---------STFYTGSGCDKVIANRPGDRIYA-QAGDTIKRLNGSVLTTVTTDQSSLVG 307
+TF G IA+ D + + A D+I+ + + TTVT L G
Sbjct: 3554 DITALNITAATF----GASVTIADVGADTLVSIGAADSIRLVGVADATTVTAADFILAG 3608
Score = 69.7 bits (169), Expect = 2e-15
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
Query: 161 AGAGYTRLFGGKGDDVLRLGSGLGYAEGNDGDDTLIGGTGDNVMYGNNGNDRLYAGAGAK 220
AGA + L G GDD+L ++GDDT+ G G++ + G +GND+L GAG
Sbjct: 2428 AGAEHIVLGGTNGDDIL---------VSSEGDDTVWGDAGNDRIEGGDGNDQLRGGAGDD 2478
Query: 221 SKTSY-----LDGGNGKDLLYAGNGHTVLHGGPGDDRLI-GHDRSTFYTGSGCDKVIANR 274
+ + GG+G D+L+ GNG ++ GG G+D ++ G D S G G D ++ ++
Sbjct: 2479 IISDMGGDDNIQGGDGNDVLHGGNGVNLIIGGFGNDFIVTGEDASEAIGGQGNDFILGSK 2538
Query: 275 PGDRIYAQAGD 285
++ GD
Sbjct: 2539 ANEQDMGNEGD 2549
Score = 69.3 bits (168), Expect = 2e-15
Identities = 49/169 (28%), Positives = 70/169 (41%), Gaps = 41/169 (24%)
Query: 149 IVEAGDGNDRVQAGAGYTRLFGGKGDDVLRLGSGLGYAEGNDGDDTLIGGTGDNVMYGNN 208
++ GND + G +LFGG G+D+L G + G DG+DTL GG G + M G
Sbjct: 3183 VISGLGGNDTLNGLGGSDQLFGGIGNDILNGGDDPDFLNGEDGNDTLNGGLGADAMNGGA 3242
Query: 209 GNDRLYAGAGAKSKTSYLDGG---------------NGKDLLYAGN-------------- 239
GND + T L+GG N ++L Y G+
Sbjct: 3243 GNDTFLVDNAGDTVTEALNGGTDQVQTSLASYTLGANVENLTYTGSSAFTGTGNALANTL 3302
Query: 240 ----GHTVLHGGPGDDRLIGHDRSTFYTGSGCDKVIANRPGDRIYAQAG 284
G+ +L+GG G DRL+G G G D + + GD + G
Sbjct: 3303 TGGAGNDLLNGGAGADRLVG--------GVGNDTYVVDDAGDVVVEATG 3343
Score = 67.4 bits (163), Expect = 8e-15
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 128 HLKTHGGN-DNIRIDANVTQPVIVEAGDGNDRVQAGAGYTRLFGGKGDDVLRLGSGLGYA 186
H+ G N D+I + + V +AG NDR++ G G +L GG GDD++ G
Sbjct: 2432 HIVLGGTNGDDILVSSEGDDTVWGDAG--NDRIEGGDGNDQLRGGAGDDIISDMGGDDNI 2489
Query: 187 EGNDGDDTLIGGTGDNVMYGNNGNDRLYAGAGAKSKTSYLDGGNGKDLLYAGNGHTVLHG 246
+G DG+D L GG G N++ G GND + G A S GG G D + + G
Sbjct: 2490 QGGDGNDVLHGGNGVNLIIGGFGNDFIVTGEDA----SEAIGGQGNDFILGSKANEQDMG 2545
Query: 247 GPGDD 251
GDD
Sbjct: 2546 NEGDD 2550
Score = 61.2 bits (147), Expect = 6e-13
Identities = 45/145 (31%), Positives = 64/145 (44%), Gaps = 23/145 (15%)
Query: 133 GGNDNIRIDANVTQPVIVEAGDGNDRVQAGAGYTRLFGGKGDDVLRLGSGLGYAEGNDGD 192
GG+DNI + GDGND + G G + GG G+D + G A G G+
Sbjct: 2484 GGDDNI------------QGGDGNDVLHGGNGVNLIIGGFGNDFIVTGEDASEAIGGQGN 2531
Query: 193 DTLIGGTGDNVMYGNNGNDRLYAGAGAKSKTSYLDG-GN----GKDLLYAGNGHTVLHGG 247
D ++G + GN G+D + G + D GN G D+ GN + +G
Sbjct: 2532 DFILGSKANEQDMGNEGDDWIEKGTSDGAPGDNFDPLGNDPIIGNDVFVGGNENDKFNGE 2591
Query: 248 PGDDRLIGH----DRSTFYTGSGCD 268
GDD ++G DR + GSG D
Sbjct: 2592 GGDDIMVGSLGFGDR--YIGGSGYD 2614
Score = 48.5 bits (114), Expect = 4e-09
Identities = 47/190 (24%), Positives = 73/190 (38%), Gaps = 53/190 (27%)
Query: 134 GNDNIRIDANVTQPVIVEA-------GD-GNDRVQAGAGYTRLFGGKGDDVLRLGSGLGY 185
G D++ + +I+ + GD G+D ++ GAG + GG GDD++ G
Sbjct: 902 GEDHVVLGGTAGNDIIISSEGDDTLYGDAGDDLLEGGAGNDAVLGGAGDDIITDSFGDNR 961
Query: 186 AEGNDGDDTLIGGT---GDNVMYGNNGNDRL---------YAGAGAK----SKTSYLDGG 229
EGN G+D ++ G+ N++ G +G D + + G G +KT+ G
Sbjct: 962 LEGNAGNDVIVAGSMGVAGNLILGGDGQDFIITTEDISTTFGGLGDDFILGAKTNLPPTG 1021
Query: 230 N----------------------------GKDLLYAGNGHTVLHGGPGDDRLIGHDRSTF 261
N G D+ G G + G GDD +G D
Sbjct: 1022 NEGDDWIEKGTQDGAPGDNFAPLLGDEVIGNDIFVGGGGFDEMIGEGGDDIFVGSDAQDK 1081
Query: 262 YTG-SGCDKV 270
G SG D V
Sbjct: 1082 MDGMSGFDWV 1091
Score = 41.6 bits (96), Expect = 5e-07
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 22/181 (12%)
Query: 120 KDGKALTFHLKTHGGNDNIRIDANVTQPVIVEAGDGNDRVQAGAGYTRLFGGKGDD---V 176
+DG + +T G + N +++N +I+ A + T L G D
Sbjct: 2334 QDGDRFYYLERTAGLSMNAELESNSFAKLIM----------ANSSATHLPGLVFSDPGFY 2383
Query: 177 LRLGSGLGYAEGNDGDDTLIGGTGDNVMYGNN----GNDRLYAG-AGAKSKTSYLDGGNG 231
L L Y EG D L G G+ V++ ++ G D Y AGA+ L G NG
Sbjct: 2384 LELDQTKQYNEGLGSADPL-GENGEQVVFRDSPLTAGPDTHYIRYAGAEHIV--LGGTNG 2440
Query: 232 KDLLYAGNGHTVLHGGPGDDRLIGHDRSTFYTGSGCDKVIANRPGDRIYAQAGDTIKRLN 291
D+L + G + G G+DR+ G D + G D +I++ GD Q GD L+
Sbjct: 2441 DDILVSSEGDDTVWGDAGNDRIEGGDGNDQLRGGAGDDIISDMGGDD-NIQGGDGNDVLH 2499
Query: 292 G 292
G
Sbjct: 2500 G 2500
Score = 30.4 bits (67), Expect = 0.001
Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 131 THGG-NDNIRIDANVTQPVIVEAGD-----GNDRVQAGAGYTRLFGGK--GDDVLRLGSG 182
T GG D+ + A P GD G G + L G + G+D+ G G
Sbjct: 1001 TFGGLGDDFILGAKTNLPPTGNEGDDWIEKGTQDGAPGDNFAPLLGDEVIGNDIFVGGGG 1060
Query: 183 LGYAEGNDGDDTLIGGTGDNVMYGNNGND 211
G GDD +G + M G +G D
Sbjct: 1061 FDEMIGEGGDDIFVGSDAQDKMDGMSGFD 1089