Pairwise Alignments

Query, 481 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 515 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  241 bits (616), Expect = 3e-68
 Identities = 149/465 (32%), Positives = 258/465 (55%), Gaps = 8/465 (1%)

Query: 14  LSACTVGPDFQRPQGPQVTQWSEPQGRQAASRAVNDPLQERWWDVFHDEQLSALTRRALT 73
           LSAC +GPD+QRP+  +  Q+ E QG + A+ + +   +  WW+++ D QL+ L  R  T
Sbjct: 53  LSACAIGPDYQRPEVVEPAQFKEAQGWRQATPS-DSLARGAWWELYGDRQLNDLVMRLNT 111

Query: 74  DNLDLKLASSRLQQSRAVRQVTTAERYPNVNANGDYQRKRNSGKGLSDPSGNNGRSAFNQ 133
            N  +  A +R +Q++A+ + +    YP V+ +    R  + G G S+ S ++  S    
Sbjct: 112 ANQTVAQAEARFRQAQALARSSRGAFYPTVDLSVGKTRA-SQGTGSSNASLSSSSSGIRD 170

Query: 134 W-DMGFSASWELDFWGRVKRETEAADATLQVAENDRRAVLLSVLAETAQNYIQLRGVQNT 192
             +     SWE D WG+++R  EA +A+ + +  D  A+ LS  +E  Q+Y+QLR +   
Sbjct: 171 TLNAQLGVSWEADIWGKLRRGLEANEASAEASSADLAAMRLSQQSELVQSYLQLRVMDEQ 230

Query: 193 RAVTEQNLDVARHSLKLSQLRLADGVATDLDVAEAAAQVAAIEARLPDLQQRQDQLINAL 252
             + +  L+  + SL++++ +   GV+    VA+A  Q+   +A L DL  ++ QL NA+
Sbjct: 231 TRLLQATLETYQRSLQMTENQYRAGVSGKDAVAQAQTQLKTTQASLIDLIWQRAQLENAI 290

Query: 253 SLLMGEPPQALHAQLSKDA-AVPQTQRQVAIGLPSELAERRPDIRQAEARLHAATASIGV 311
           ++L+GE P   +  +SKD  A+PQ    + + LPS+L ERRPDI  AE  + AA A+IGV
Sbjct: 291 AVLIGEAPANFNLAVSKDIPALPQ----IPVSLPSQLLERRPDIASAERSVIAANANIGV 346

Query: 312 AKGDFYPRITLSGSLGSQAMQLSDFGSWGSRAFAFGPQFSLPLFNGGRLQGMLNLREAQQ 371
           AK  +YP ++LS + G  +   +D+ S  +R ++ GP+ ++ LF+GG+    ++   A  
Sbjct: 347 AKAAYYPDLSLSLAGGYSSSTYADWISLPNRFWSVGPKLAMTLFDGGQRSAEVDRTVASY 406

Query: 372 QEAALAYQQTVLRAWHEIDDQLTRYNASQLRRDSLAEAVRQNQIALRTAQQQYVEGVVDF 431
            E    Y+QTVL  + E+++ + +    +       EA+   + +LR  Q QY  G++ +
Sbjct: 407 DETVAKYRQTVLDGFREVENYMVQLKVLEDEAVVSNEALEAARESLRLTQNQYKAGLIAY 466

Query: 432 VNVLTVQSALLATQEQWVDSSTGVSLAMVGLYKALGGGWESVYPL 476
           ++V+TVQ+  L+ +   +       +A V L  ALGGGW+   P+
Sbjct: 467 LDVVTVQATALSNERTVLTLLQTRLVASVQLIAALGGGWDGQTPI 511