Pairwise Alignments

Query, 481 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 471 a.a., Multidrug efflux RND outer membrane protein OprN from Pseudomonas putida KT2440

 Score =  256 bits (654), Expect = 1e-72
 Identities = 158/464 (34%), Positives = 250/464 (53%), Gaps = 10/464 (2%)

Query: 8   TLSLISLSACTVGPDFQRPQGPQVTQWSEPQGRQAASRAVNDPLQERWWDVFHDEQLSAL 67
           +L  ++L+AC VGPD+Q P   +  Q S     +A  R+  + L   WW  F D  L+ L
Sbjct: 10  SLLALALAACAVGPDYQAP-ATEPAQLSSDVQAKAYDRSRFESL---WWKQFDDPVLNQL 65

Query: 68  TRRALTDNLDLKLASSRLQQSRAVRQVTTAERYPNVNANGDYQRKRNSGKGLSDPSGNNG 127
            + +L  N DL++A +RL+ +R++R+    + +P V +        + GKG   P     
Sbjct: 66  VQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRAS----SDLGKG-QIPGQTTE 120

Query: 128 RSAFNQWDMGFSASWELDFWGRVKRETEAADATLQVAENDRRAVLLSVLAETAQNYIQLR 187
           R    ++D+G   +WELD +GR++R+ EA++A   VA  D + + +S++AE    Y QLR
Sbjct: 121 RVNSERYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLIAELVDAYGQLR 180

Query: 188 GVQNTRAVTEQNLDVARHSLKLSQLRLADGVATDLDVAEAAAQVAAIEARLPDLQQRQDQ 247
           G Q    +   NL   + S  +++     GV  DLDV  A A++A +EA +P LQ  Q +
Sbjct: 181 GAQLREKIALANLKTQQESRTITETLRDAGVGNDLDVVRADARLAGVEATVPQLQAEQAR 240

Query: 248 LINALSLLMGEPPQALHAQLSKDAAVPQTQRQVAIGLPSELAERRPDIRQAEARLHAATA 307
             + ++ L+G+ P AL   LS  A +P   + + +G P EL  RRPDIR AE +L AATA
Sbjct: 241 ARHRIATLLGQRPDALSVDLSPKA-LPAIAKALPVGDPGELLRRRPDIRSAERQLAAATA 299

Query: 308 SIGVAKGDFYPRITLSGSLGSQAMQLSDFGSWGSRAFAFGPQFSLPLFNGGRLQGMLNLR 367
           ++GVA  D +PR++LSG LG  A + S  GS  + A+A GP  +   F+ G ++  L   
Sbjct: 300 NVGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGA 359

Query: 368 EAQQQEAALAYQQTVLRAWHEIDDQLTRYNASQLRRDSLAEAVRQNQIALRTAQQQYVEG 427
           +A  + A   Y+Q VL A  E  +  + Y+ +Q R  SL      ++ A   A  +Y EG
Sbjct: 360 KADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRKAAELASIRYREG 419

Query: 428 VVDFVNVLTVQSALLATQEQWVDSSTGVSLAMVGLYKALGGGWE 471
            VD++ +L  +   L+ ++        +   +V +YKALGGGW+
Sbjct: 420 TVDYLVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGWQ 463