Pairwise Alignments

Query, 481 a.a., RND transporter from Pseudomonas simiae WCS417

Subject, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score =  609 bits (1571), Expect = e-179
 Identities = 309/464 (66%), Positives = 366/464 (78%)

Query: 9   LSLISLSACTVGPDFQRPQGPQVTQWSEPQGRQAASRAVNDPLQERWWDVFHDEQLSALT 68
           L  + L+ CT+GPDFQRP      QW+  QG  AAS+   +PL+ RWW+ FHD +LSAL 
Sbjct: 11  LLAVLLTGCTLGPDFQRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWETFHDARLSALI 70

Query: 69  RRALTDNLDLKLASSRLQQSRAVRQVTTAERYPNVNANGDYQRKRNSGKGLSDPSGNNGR 128
           +R    NLDL++AS+RL QSRA+R    A+  P+V+ N  Y R RNS  GLSDPSG  G+
Sbjct: 71  QRVAERNLDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRARNSADGLSDPSGKAGK 130

Query: 129 SAFNQWDMGFSASWELDFWGRVKRETEAADATLQVAENDRRAVLLSVLAETAQNYIQLRG 188
            AFN W     A WELD WGRV+R+ EAADAT++VAENDRR VLL++L+ETA NYIQLR 
Sbjct: 131 EAFNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNYIQLRA 190

Query: 189 VQNTRAVTEQNLDVARHSLKLSQLRLADGVATDLDVAEAAAQVAAIEARLPDLQQRQDQL 248
           VQ+T  VT+ NL VARHSLKLSQ R A+GVAT LDVA+A+AQVA+IE+RLP L+ ++D L
Sbjct: 191 VQHTLDVTQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIESRLPSLEAQRDDL 250

Query: 249 INALSLLMGEPPQALHAQLSKDAAVPQTQRQVAIGLPSELAERRPDIRQAEARLHAATAS 308
           INALSLL  EPP++L A+L +   +P  Q++ AIGLPSELAERRPDIRQAEARLHAATAS
Sbjct: 251 INALSLLAAEPPRSLQAELLQGGELPAPQQKFAIGLPSELAERRPDIRQAEARLHAATAS 310

Query: 309 IGVAKGDFYPRITLSGSLGSQAMQLSDFGSWGSRAFAFGPQFSLPLFNGGRLQGMLNLRE 368
           IGVAK DFYP I LSGS+G QA+QLSDFG W SR FAFGPQ SLP+F GGRL+G L LRE
Sbjct: 311 IGVAKADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKGTLELRE 370

Query: 369 AQQQEAALAYQQTVLRAWHEIDDQLTRYNASQLRRDSLAEAVRQNQIALRTAQQQYVEGV 428
           AQQQEAAL Y++ VL AWHEIDD L  YNASQLRRD LAEAVRQN+IAL TAQ+QYVEG 
Sbjct: 371 AQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQRQYVEGA 430

Query: 429 VDFVNVLTVQSALLATQEQWVDSSTGVSLAMVGLYKALGGGWES 472
           VDF+NVLTVQ ALLA++EQW+DSS  VS A+VGLYKALGGGW++
Sbjct: 431 VDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGWQA 474