Pairwise Alignments

Query, 375 a.a., ABC transporter for branched-chain amino acids, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 366 a.a., Leu/Ile/Val-binding protein from Xanthobacter sp. DMC5

 Score =  278 bits (710), Expect = 2e-79
 Identities = 150/357 (42%), Positives = 212/357 (59%), Gaps = 3/357 (0%)

Query: 12  FAAM-VLAGVAGHSFAADTIKIGIAGPKTGPVTQYGDMQFMGAKQAIADINAKGGVDGKM 70
           FAA+ V AG+     A   +K+G AGP TG +  +G     G +QA+ DINA GG++G+ 
Sbjct: 6   FAALAVCAGLVLAPAAHADVKLGAAGPLTGSIAAFGTQMKTGVEQAVNDINAAGGINGQK 65

Query: 71  LEAKEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAATS 130
           +     DD   P+Q VA ANK++ DG  FV+GH+ S  +  AS  Y + GV+ I+PA+T+
Sbjct: 66  IVLLVADDGGKPEQGVAAANKLITDGATFVIGHVNSGISIAASSDYAEAGVLQISPASTN 125

Query: 131 PEITARGYKLIFRTIGLDSAQGPAAGNYIADHVKPKIVAVLHDKQQYGEGIATAVKQTLE 190
           P  T R     FRT G D  QGP AG ++A+  K   +A++HDK  YG+G+A   ++ L 
Sbjct: 126 PAYTERKLWNTFRTAGRDDQQGPVAGAFLAEKFKDGKIAIVHDKSPYGKGLADETQKALN 185

Query: 191 KKGTKVAVFEGLNAGDKDFSSIIQKLKQANVDFVYYGGYHPELGLILRQAKEKGLNAKFM 250
           K G K  ++EG+N G+KD+S+++ K+K A VD +Y+GG HPE GLI+RQ +++GL    M
Sbjct: 186 KAGVKEVMYEGINPGEKDYSALVSKMKAAGVDVIYFGGLHPEAGLIVRQMRDQGLKTVLM 245

Query: 251 GPEGVGNDSISQIAQGASEGLLVTLPKSFDTDPANKAIVEEFAKNKQDPTGPFVFPAYSA 310
           G + + +     IA     G L+T       +PA K IVE       D  G +V  +Y+ 
Sbjct: 246 GGDALADKEYWNIAGTGGTGTLMTFGPDPRKNPAAKGIVEAMTAKGIDAEG-YVLYSYAG 304

Query: 311 IEVIAGGIKAAKSEDTAKVAEAIHAG-TFKTPTGDLSFDAKGDLKDFKFVVYEWHFG 366
           ++VI    +AAKS D  KVA  IH+G TF+T  G LSFD KGD+    FVVYEW  G
Sbjct: 305 VQVIKQAAEAAKSLDPKKVAAQIHSGMTFQTVLGPLSFDKKGDITKPDFVVYEWKDG 361